Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00256 ATGGTTTCATCCATGGCTGTTCGAAAACCCAATGAGAGGTTATCCATCTCGCCTCTACAGGTCAAAAGGGGTAGGCTACTAAAGAAGGTAGCGGGAAAGCTCTTCAAAAGGAAGATACAAGAGTTCAACCGACATGATTCGGAAAAACAAACTGCAAGAGTTAAATTAGAGAAAGCTTTGAGACGAAAGAGAGCTGCAGCTGATACTATATATGATGCTTCGGAAGCTCAATCTTCCGTTTTAGAACGAGGGAAAGAAGTTCAAGCAAATCTAGCTCCTGAATTTCCCACCTTTATCAAGTGCATGCTCCCATCACATGTATCTGGAGGATTTTGGCTGGGACTTCCGAACAACTTTTGTCAGTTGCATTTGCCGAAGACTAATACGATTATTACTTTGGAAGATGAAAGGGGGGAAGAATATGAAACAAAATATCTTTGTGCAAAGGTGGGGCTAAGTGCTGGTTGGAGAGGATTTTCCTTGGCTCACAATTTAGTCAAGGGGGATGTCCTAGTTTTCCATTTAGTCCAACGTTCCAAGTTTAAGGTCTACATTATAAGATCTAATGGGTCTGATGAAGTGGATGGTGCTCTTGGCCTTCTTAAATTCATTGATTGCAAGAAAGAAAAGGATTTTTGTAAGTGTCCTATGATTCAACATATATCTGGACTTGTAAGTAGAACCGAAAATGAGGTTTTCTGTCTCATTTTGCTAGATGTTCCTCAAGAAAATGATCCAAAAGGTAACCAGATGATCTGTGGTGCTAGAGTATCTCAATCAGATCAGCTTGAAAATACTAGTGAAGATTTTGGATCTGAAGTTATGGATGGGATTAAATTATCAGAATCTGTCATCAGTTTTCAGGAAGTGACGGGCATTGAGAATTTCAGCATTCATGTGGATGGTTTGGTTATTGACTCACAGCTTAACAAGTACATCAGGACCAAGTATTATGAACTATGTTGCAGTCAGAGATCATTTCTTCATGATCATCTTCTTCAGGGTCTTAACTGTAAACTTGCTGCTGGTATCATTTCTGAAACCATCAATATTGCTGATGCCATTAAAGCCAGCAAGATTATTACCTGTCCTGATAGTTTAGCTATATGGGACCAAACTTTGAAGGCCTTTGAGGCGATGGGTATGACTGTCAGCTTTCTGCGTGCTCGGCTAAACCAGCTCATAAGTCTTGCTCTGAAATCAAAGAGGTACAAAGAGGTTAAGCTTGAACGAGATCGTGCAGAAGAGGAGAAGAAAACTCTCGAAGCAAAGCTTGTAGAAGTGAAAAAGACCATAGATAGAATTAATGCTGAGATTGAGACCCAGAATATGAAATCTGAGAAGCTGGAGGTTATGTTTCAAGAACTGGCTAACGCTCCTTGGGGAATAGAAACTTTCGAAATCAAAATGGTGGTCTCAAAATTGACATACGAGGAATGCAGGCGACAGAGGCTCGAGGAGAACAAGAAGAGGATGGAGGAGCTCAATCTCCACAAGCTTGCAAAGGCTTTGAAACCTTCCCCATCATCAAAGACCTCCCCTGCAAAGCCGAGGGGACCTCACCGGGTGAGTCCTTCTTCGGTGCCAGTGAGAAGGTCCAGCCGCGTCGCAAGCTTGCCTCCTGCAAACTACAAGGAAGCCCCACTTGAGCCTCTGCTGAGAACTAGAAGGGGCTATCAAAGAAGGGACTTACTAAACCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATTGATAGAGCAGAAGAACTTATGTCAGGTTTAGATTCTGAACACCCGAGTTTCATCAAGCCCATGCTTCAGTCACATGTAACTGGAGGATTTTGGCTGGGTCTCCCAGTTCAATTTTGCAAGACACACCTGCCGCAACATGATGAAATGATAGCTTTGGTGGACGAGGATGGTAATGAATCTCTAACAAAATACCTTGCTGATAAAACTGGTCTCAGCGGTGGTTGGCGAGGGTTTGCAATTGATCATGAACTGGTCGATGGGGACGCATTGGTGTTTCAGTTGATTAAACCTACGAAATTTCAGGTGTACACCATCAGGGCCCACGAATCAGAAGACAATGAGGAAAATACACCAACAGAGGAAGAGAATGAGGAAAAGGAAAATGTGGAGGATCTGGATGACACACACTTGAACCGGAGGTCCAAAAGAACCAGAACAGGATAA 2181 0.4269 MVSSMAVRKPNERLSISPLQVKRGRLLKKVAGKLFKRKIQEFNRHDSEKQTARVKLEKALRRKRAAADTIYDASEAQSSVLERGKEVQANLAPEFPTFIKCMLPSHVSGGFWLGLPNNFCQLHLPKTNTIITLEDERGEEYETKYLCAKVGLSAGWRGFSLAHNLVKGDVLVFHLVQRSKFKVYIIRSNGSDEVDGALGLLKFIDCKKEKDFCKCPMIQHISGLVSRTENEVFCLILLDVPQENDPKGNQMICGARVSQSDQLENTSEDFGSEVMDGIKLSESVISFQEVTGIENFSIHVDGLVIDSQLNKYIRTKYYELCCSQRSFLHDHLLQGLNCKLAAGIISETINIADAIKASKIITCPDSLAIWDQTLKAFEAMGMTVSFLRARLNQLISLALKSKRYKEVKLERDRAEEEKKTLEAKLVEVKKTIDRINAEIETQNMKSEKLEVMFQELANAPWGIETFEIKMVVSKLTYEECRRQRLEENKKRMEELNLHKLAKALKPSPSSKTSPAKPRGPHRVSPSSVPVRRSSRVASLPPANYKEAPLEPLLRTRRGYQRRDLLNRVYASDEVRQYAIDRAEELMSGLDSEHPSFIKPMLQSHVTGGFWLGLPVQFCKTHLPQHDEMIALVDEDGNESLTKYLADKTGLSGGWRGFAIDHELVDGDALVFQLIKPTKFQVYTIRAHESEDNEENTPTEEENEEKENVEDLDDTHLNRRSKRTRTG 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00256 726 SUPERFAMILY DNA-binding pseudobarrel domain 589 686 IPR015300 -
Bach11g00256 726 SMART B3_2 98 189 IPR003340 GO:0003677
Bach11g00256 726 SMART B3_2 596 690 IPR003340 GO:0003677
Bach11g00256 726 SUPERFAMILY DNA-binding pseudobarrel domain 93 190 IPR015300 -
Bach11g00256 726 CDD B3_DNA 96 187 IPR003340 GO:0003677
Bach11g00256 726 ProSiteProfiles B3 DNA-binding domain profile. 98 189 IPR003340 GO:0003677
Bach11g00256 726 Gene3D - 572 689 IPR015300 -
Bach11g00256 726 Gene3D - 74 190 IPR015300 -
Bach11g00256 726 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 383 690 IPR044837 -
Bach11g00256 726 Pfam B3 DNA binding domain 596 685 IPR003340 GO:0003677
Bach11g00256 726 Pfam B3 DNA binding domain 98 188 IPR003340 GO:0003677
Bach11g00256 726 CDD B3_DNA 594 685 IPR003340 GO:0003677
Bach11g00256 726 MobiDBLite consensus disorder prediction 693 708 - -
Bach11g00256 726 MobiDBLite consensus disorder prediction 686 726 - -
Bach11g00256 726 ProSiteProfiles B3 DNA-binding domain profile. 596 687 IPR003340 GO:0003677
Bach11g00256 726 Coils Coil 475 502 - -
Bach11g00256 726 MobiDBLite consensus disorder prediction 499 541 - -
Bach11g00256 726 Coils Coil 397 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00256 Bach-Chr11 1751228 1755893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00256 470 723 B3 DNA Binding Superfamily AT3G19184 58.462 1.40e-83 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach11g00256 B3 9.2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00256 - - qsa:O6P43_011706 517.694