Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00229 ATGGCTAACCCTCCTTCTCTGCAGGCCTTCGGCTGCTTTCTCTTATGTTCTCTCTTTGTCTCTTCTTGTCTATCAACCTTGTCTTACGCCATCACTGATTCTGAAGCTTTTTTCATCTCTCGCCGCCAGCTCCTACATTTCCAGGAAAAGGGTGATGGCATTCCCGCTGACATTAAATGTGACGTTAATATCACCAATGAAAGACTGAAACCAGCTTATGTTGCCCTTCAAGCATGGAAAAAGGCCATATACTCTGACCCTAGCGGCATAACCGATAACTGGGTTGGTCCTGATGTTTGTTCCTACAATGGCGTCTTCTGTGCCCCTGCCCTCGATGACCCCAACGTGGAAGTTGTTGCTGGTATTGATTTCAACAATGCAGACATTGCTGGGTACCTCCCACCAGAGTTGGGTCTCCTGAAAGACCTTGCTCTTTTCCACATTAACTCTAACAGGTTCTGTGGAATTGTACCCCAGAGCTTTGAGAGTCTTACCCTTATGTTTGAATTTGATATCAGCAACAACCGCTTTGTGGGAACTTTTCCTTCAGTGGTTCTCACATGGTCAGGCCTTAAATACTTGGACATCAGATTCAATGACTTTGAAGGACCTTTGCCTCCAGAGCTCTTCGAGAAAGGCCATGATGCTGTGTTCTTAAACAACAACCGTTTCACATCCATGATCCCTGAGACTTTGGGCAAATCCAATGCCTCGGTTGTGACATTCGCGTACAACAACTTCTCAGGTTGCATTCCCAAGTCAATTGGGAACATGCCCAACTTGAATGAGATTGTTTTCTTGGGTAATGGACTCGAAGGTTGTTTCCCACAGGAGATTGCATCGCTAGGAAAGTTGACGGTTTTGGATGCTAGCAACAATGGGTTTATAGGCACTTTGCCTAACTTGTCAGGTTTGAAGAGCGTGGAGGTCATTGACATCTCACATAACAAGCTGGCTGGGTATTTGCCCGACTCCATTTGCAAGTTGCCCAGATTATCCAACTTCACATTCTCAGACAACTACTTCAATGGGGAGGCTCAAGCTTGTATACCTTCTCCAAAGGCACGAGTTGTGTTAGACGACACTGACAATTGCTTACCAGGAAGACCCAATCAAAAGACGACCAAGCAATGCTTCCCAGTGGTGAGTCGTTCTGTGGATTGTAGTAAGAACTGTGGCGGCTCTGGCAACAGCAATTCAACTCCAAACCCAACCCCAACACCTACAACTGTGCCTAAAAAGCAGACACCGGTAGAGGATATCCCACCTTCAACAACACCTCTTCCTCAATCCCCACCTCCACCAGTTCACTCTCCACCACCACCAGTCTACTCTCCTCCACCTCCATCTCCACCGCCACCAGTTCACTCTCCACCGCCACCAGTTCACTCTCCACCACCACCAGTCCACTCCCCACCGCCACCAGTTCACTCTCCACCACCACCAGTCCACTCCCCACCGCCACCAGTTCACTCCCCACCGCCACCAGTTCACTCTCCACCACCACCAGTGCCCTCTCCTCCACTACCATCTCCACCACCGCCAGTGCACTCTCCTCCACCTCCATCCCCACCACCGCCAGTCCACTCTCCCCCACCACCATCTCCACCACCGCCAGTCCATTCCCCACCACCACCAGTCTACTCTCCACCCCCACCGATCTACTCACCTCCACCACCGCCAATCCAATCCCCACCCCCACCGGTCTACTCACCTCCACCACCGCCAATCCAATCCCCACCCCCACCAGTCTACTCACCTCCACCACCGCCAATCCAATCCCCACCACCACCAGTCTACTCTTCACCCCCACCGGTCTACTCACCTCCACCACCACCACCAGTCCACTCACCTCCACCACCGGTCTATTCACCTCCACCCCCACCGCAATGGGATGACATAATCCTCCCACCGGCCTTTGGATCCCAATACAGCTCGCCACCTCCACCCGCAGTCGCTGCAGAGACAGCATCCAAGAGCATTGCAGATTTGCAAATCAATGCTGAAGATTCAGATTCTTCTAAAGAGGAGGAAGGGGCTGAAGAATCTGTAAACAAAAAGGAAAGTGAAGATGAGAATGAAAAACTACGAAATTCTGCTCTTGATAAATTGGAGAAGGCTAGTGACGATACAATACTTAGCCAGACAAGGCCTTAA 2157 0.5067 MANPPSLQAFGCFLLCSLFVSSCLSTLSYAITDSEAFFISRRQLLHFQEKGDGIPADIKCDVNITNERLKPAYVALQAWKKAIYSDPSGITDNWVGPDVCSYNGVFCAPALDDPNVEVVAGIDFNNADIAGYLPPELGLLKDLALFHINSNRFCGIVPQSFESLTLMFEFDISNNRFVGTFPSVVLTWSGLKYLDIRFNDFEGPLPPELFEKGHDAVFLNNNRFTSMIPETLGKSNASVVTFAYNNFSGCIPKSIGNMPNLNEIVFLGNGLEGCFPQEIASLGKLTVLDASNNGFIGTLPNLSGLKSVEVIDISHNKLAGYLPDSICKLPRLSNFTFSDNYFNGEAQACIPSPKARVVLDDTDNCLPGRPNQKTTKQCFPVVSRSVDCSKNCGGSGNSNSTPNPTPTPTTVPKKQTPVEDIPPSTTPLPQSPPPPVHSPPPPVYSPPPPSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVPSPPLPSPPPPVHSPPPPSPPPPVHSPPPPSPPPPVHSPPPPVYSPPPPIYSPPPPPIQSPPPPVYSPPPPPIQSPPPPVYSPPPPPIQSPPPPVYSSPPPVYSPPPPPPVHSPPPPVYSPPPPPQWDDIILPPAFGSQYSSPPPPAVAAETASKSIADLQINAEDSDSSKEEEGAEESVNKKESEDENEKLRNSALDKLEKASDDTILSQTRP 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00229 718 PRINTS Proline rich extensin signature 415 431 - -
Bach11g00229 718 PRINTS Proline rich extensin signature 396 408 - -
Bach11g00229 718 PRINTS Proline rich extensin signature 454 475 - -
Bach11g00229 718 PRINTS Proline rich extensin signature 439 451 - -
Bach11g00229 718 MobiDBLite consensus disorder prediction 393 718 - -
Bach11g00229 718 Coils Coil 686 706 - -
Bach11g00229 718 SUPERFAMILY L domain-like 74 366 - -
Bach11g00229 718 Gene3D Ribonuclease Inhibitor 73 366 IPR032675 -
Bach11g00229 718 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 72 370 - -
Bach11g00229 718 MobiDBLite consensus disorder prediction 669 712 - -
Bach11g00229 718 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 18 533 - -
Bach11g00229 718 Pfam Leucine rich repeat N-terminal domain 74 107 IPR013210 -
Bach11g00229 718 ProSiteProfiles Leucine-rich repeat profile. 284 306 IPR001611 GO:0005515
Bach11g00229 718 MobiDBLite consensus disorder prediction 422 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00229 Bach-Chr11 1590326 1593869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00229 10 391 Trihelix Transcription Factor Family AT3G19020 65.803 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00229 - - qsa:O6P43_011664 556.214