Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00224 ATGCCGCGCCCTTGTTTCCACAAGCTTATTGTTCCTTCGACGGTCCAAGCCAGGCAACTGAGGATTCCAGATAATTTTCTGAGAAAATCTGGGGGTGACCTTTCTACAATTGCTTCCTTCATTGTTCCTGATGGTAGTGTTTGGCGTATTGGATTAAAAAAAGCAGACAACAAATTTTGGTTCCATGATGGTTGGCAGGAATTTGTTCAACGCTACTCCATTGGCGTTGGATACTTTTTAGTGTTCAGATATGAAGGGAACTCATCTTTCAAAGTTAATATTTTCAATTTGGCTACTTCTGAGATAAACTATCAATCAACCATGCGAAGTAGTAAAGAGGGTTCTTACTGTGCTAATCAACATAGTATTTTTGATGAAATTGATGATCAAGATTCCTTTGAAATGTTGGATTCGTCACCTTCTGGCCTTACTCCCGGTGCATTGCAAAACAAGGTTTTTGCTGGATCTGTTGGGCAATTGACACCTGCCAAGAATTATTCTCCTCCAGCATTGCAGAATTTGTTTAATGGGTCTAAACTTAATTCCATAAACTGGGGAGATGGTGGAAATGTGCTTCCTTCTAAGGGCACCAATTCACTAGGAGCTCGCTCTACCCGAGATATAGGTGTTCAGTTTAATGTGATTGAGTTTAAAAGGTATACTGAAGAATTTAACGTGTGCAGTTCTAATAATGAAGAACAAAAATCTAAAAAAAGGAAGAGGCGAAAATCTGATCCTTATGGTCAGGAATCTTCTTCCCAGAATGAAGAGGAAGTAGAAATGCGCTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACTGTTACAGCAGAGGAAAGAGAAAGGGCAATAAACTCAGCAAAAGCATTTGAGCCACCAAATCCTTTTTGTAGGGTTGTCCTGCGACCTTCCTATTTGTATAGGGGATGCATAATGTACTTGCCATCTTGCTTTGCAGAGAAGCATTTGAATGGGGTTTCCGGATTCATCAAACTTCAGATTGCTGATGGAAGACAGTGGCCTGTTCGCTGCCTCTATAGAGGTGGTAGAGCAAAGTTAAGCCAAGGGTGGTTTGAATTTACGTTAGAGAACAATATAGGGGAAGGTGATGTCTGTGTGTTTGAGCTGCTTAGAATGAAGGAGGTAGTGCTGAAAGTTACAGTATTCCGTGTTGTTGAGGATGCTGGATTGTTAAACCCTCCTTTGCAACAAAATGTCAGCCCAACTAAACTGTTGATGAACCCTCACATGGGCCAAAATGTCAGCCCTACGAAACTGTTGAATGCTCCCTTGCAGCATACCATCAGCCCTACTAAACCAGTTAGAAATTACCAGTGA 1341 0.4094 MPRPCFHKLIVPSTVQARQLRIPDNFLRKSGGDLSTIASFIVPDGSVWRIGLKKADNKFWFHDGWQEFVQRYSIGVGYFLVFRYEGNSSFKVNIFNLATSEINYQSTMRSSKEGSYCANQHSIFDEIDDQDSFEMLDSSPSGLTPGALQNKVFAGSVGQLTPAKNYSPPALQNLFNGSKLNSINWGDGGNVLPSKGTNSLGARSTRDIGVQFNVIEFKRYTEEFNVCSSNNEEQKSKKRKRRKSDPYGQESSSQNEEEVEMRFRFYESASARKRTVTAEERERAINSAKAFEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQIADGRQWPVRCLYRGGRAKLSQGWFEFTLENNIGEGDVCVFELLRMKEVVLKVTVFRVVEDAGLLNPPLQQNVSPTKLLMNPHMGQNVSPTKLLNAPLQHTISPTKPVRNYQ 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00224 446 MobiDBLite consensus disorder prediction 232 247 - -
Bach11g00224 446 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Bach11g00224 446 SMART B3_2 298 393 IPR003340 GO:0003677
Bach11g00224 446 SMART B3_2 6 98 IPR003340 GO:0003677
Bach11g00224 446 PANTHER B3 DOMAIN-CONTAINING 3 387 - -
Bach11g00224 446 MobiDBLite consensus disorder prediction 228 256 - -
Bach11g00224 446 CDD B3_DNA 4 96 IPR003340 GO:0003677
Bach11g00224 446 Gene3D - 275 395 IPR015300 -
Bach11g00224 446 ProSiteProfiles B3 DNA-binding domain profile. 298 393 IPR003340 GO:0003677
Bach11g00224 446 Gene3D - 1 98 IPR015300 -
Bach11g00224 446 SUPERFAMILY DNA-binding pseudobarrel domain 291 391 IPR015300 -
Bach11g00224 446 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Bach11g00224 446 CDD B3_DNA 296 391 IPR003340 GO:0003677
Bach11g00224 446 Pfam B3 DNA binding domain 6 95 IPR003340 GO:0003677
Bach11g00224 446 Pfam B3 DNA binding domain 301 391 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00224 Bach-Chr11 1561209 1564538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00224 1 397 B3 DNA Binding Superfamily AT3G18990 50.873 1.95e-132 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach11g00224 B3 2.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00224 - - gmx:100813285 627.476