Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00212 ATGATGACAATGGCTCCTTCTCAGCCACCGTCTCAGCAGTGGGCCCCATCTTCCTCTCCTTTTTCCTCTCCTTCTCCTTCTCCTTCTCCTTCTACTTCACCTTCCCCTTCTCACTTTGTTTGGGTCAACAAGCCATCATCGCCGCCCAAGTCGCCGGTTGACTTCAGCCCACCCTTGATTGCCATGGTAGTTGTTGTTGCCACCGCTTTCCTTGTCGTTACATATTCCCGCCTCATCTCCCGCCATCTCGTGCCTCCAATTCTTCACCTCTTTCGACGGTGGCGCCGCCGTCCAAGACGCTCTTACCTCCCGTCCTCGTCCGGGGACCTGGACTCGCTCCCTTATGACTCGCCTTTCGAGGCAATGGATGGGCCACACATGTTCTCCCCTTTCGGCCTGGACGAATCTGTGATCAAGACCATTCCATTTTCCCTCTACACAACCAAATCCAATGGTCGCTTCGAAGAGTCTCGTCGTGATTGCGCTGTGTGTTTATTGGAGTTCGAAGATGATGACTATGTTCGCACACTACCTGTTTGTTCTCACACTTTTCACGTTGATTGCATCGATGTTTGGCTCAGGTCCCATGCCAACTGTCCTCTTTGCCGCGCCGGAGTATTATGTGCTGAATCTCCCTTCAGGCCCATGATGGCGGCAAGGATTCGACCCAGTTTCGATGACGATACCATGTTGCATAGAATCAATATGGACCCTCTTATTGAAGCTCCGATACCGACAGCTCAATCACCGGTTCCAGAGATCACGCTGTGCACCGAGGAGCAATCGCCCAGAAGGAACAATAGGAATCCAGACGATCGCTTCCATGGTCGCGACTTTATGCTGAAGCGATCCTACTCGTTTGGGTTCGAACGGAGCTTGGCATCCGAGAGGATGGTGATGGAACCAGTAACGGCGTCTCCGTGGAGATACCGGAGAGGAAGTAGTAGCTTCTGGAGTAAACGGCCGTCGCCATTTGGGTCGTTGGGCAAGTCTAGAGTGTTTTCATTCAGATACTACAGGGGAATGAAGTCACCGTTCTTCCGGCGAAGGGGGTTCTTCCCTTTATCGGAGTCGAGCATGAGGTACGCCGGCGTAGGCGGAGGAAGCTCATCCCGGCGAAGCAAATCAATAGCAAGCCCCATGTTTCTAAGATCATCGGCTCTGACAACGGTGGGCGTCTCGGCTTTCTCGTCGAGCCGGCTCAGGTGTGGCGATCCCGAGGCGTTACTGTCACCGGATAGGTTTAACCGGAGATGA 1257 0.5346 MMTMAPSQPPSQQWAPSSSPFSSPSPSPSPSTSPSPSHFVWVNKPSSPPKSPVDFSPPLIAMVVVVATAFLVVTYSRLISRHLVPPILHLFRRWRRRPRRSYLPSSSGDLDSLPYDSPFEAMDGPHMFSPFGLDESVIKTIPFSLYTTKSNGRFEESRRDCAVCLLEFEDDDYVRTLPVCSHTFHVDCIDVWLRSHANCPLCRAGVLCAESPFRPMMAARIRPSFDDDTMLHRINMDPLIEAPIPTAQSPVPEITLCTEEQSPRRNNRNPDDRFHGRDFMLKRSYSFGFERSLASERMVMEPVTASPWRYRRGSSSFWSKRPSPFGSLGKSRVFSFRYYRGMKSPFFRRRGFFPLSESSMRYAGVGGGSSSRRSKSIASPMFLRSSALTTVGVSAFSSSRLRCGDPEALLSPDRFNRR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00212 418 SUPERFAMILY RING/U-box 149 208 - -
Bach11g00212 418 PANTHER RING-H2 FINGER PROTEIN ATL16 43 223 IPR044600 GO:0016567|GO:0016740
Bach11g00212 418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 207 IPR013083 -
Bach11g00212 418 MobiDBLite consensus disorder prediction 1 20 - -
Bach11g00212 418 Pfam Ring finger domain 160 203 IPR001841 -
Bach11g00212 418 FunFam RING-H2 finger protein ATL65 126 207 - -
Bach11g00212 418 MobiDBLite consensus disorder prediction 1 39 - -
Bach11g00212 418 CDD RING-H2_EL5-like 160 203 - -
Bach11g00212 418 ProSiteProfiles Zinc finger RING-type profile. 161 203 IPR001841 -
Bach11g00212 418 SMART ring_2 161 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00212 Bach-Chr11 1493558 1494814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00212 52 418 C3H Transcription Factor Family AT3G18930 49.626 1.95e-94 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00212 - K19041 gmx:100806115 552.362