Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00204 TTGTTATGTAATTGGTTGTGAAGATGGAGGACGATTATATCAGCAGCGGCGATGATTATCAATACTATGATCAGGAGTCCATGGACGACGGGTTTGAAAACGAGGAGTCTGATTTTAAGTTGGTCACTGTGAAGGGTCCCACAATCCAGGTGATTACAAGGGAATCTCTTCTAGTAGCACAGAAAGAAGATTTGCGTAAAGTGATGGACATGCTATCAGTTAGAGAGCACCATGCACGTACACTTCTTATTTATCATCGTTGGGACGTGGAGAAGCTATTTTCCGTGTATGTAGATAGGGGGAAAGCTTTCTTGTTTGCTGAAGCTGGCGTCAGTCTTGATGAACATTGTGCTTCTGAGTCATCCTTGTCGTCTTCAATAATGTGTGATATCTGCATGGAGGATGTTCCTAGTGATGAATCAACAAGAATGGATTGTGGTCACTGTTTTTGCAACAACTGTTGGACAGAACATTTTATTGTCAAGATAAATGAGGGTCAAAGTAAACGCATTAGGTGCATGGCACATAAATGCAATGCTATTTGTGATGAAGCCGTTGTGAGAAATTTAGTCAGTAAGACGCAGCCTGATATGGCTGAGAAATTTGAACGCTTTCTACTTGAATCCTACATTGAAGATAATAAGAGAGTTAAATGGTGCCCAAGCGTTCCACATTGTGGGAATGCAATACGTACTGAGGATGATCAATTATGTGAGGTAGAATGTTCGTGTGGTTTACAGTTTTGTTTCAGTTGCTTATCAGAAGCACACTCTCCTTGTTCTTGTTTGATGTGGGAACTTTGGGCTAAAAAGTGTCAAGATGAATCAGAGACTGTTAACTGGATGACAGTTCATACTAAACCTTGTCCAAAGTGCCATAAACCCGTGGAGAAGAACGGTGGTTGCAACTTGGTTAGCTGTATCTGTGGCCAAGCATTTTGTTGGCTATGTGGTGGAGCCACTGGCAGAGAACATACCTGGACAAATATAGCTAACCACAGCTGTGGTTGCTATAAAGAAGACCAAGAGAGAAAGTCTGAGCGGGCTAAACGGGATCTTTATCGATATATGCACTATCATAACCGCTATAAAGCTCACACGGATTCCTTAAAGCTTGAAAGTAAATTGAAAGAAACTATACGAGTAAAGGTTGCTCTTTCTGAAGAGAGAGATTCTAGGGTCAGAGATTACAGCTGGGTAAATAATGGACTATGCAGACTTTTCAGATCAAGGCGTATTCTATCGTATTCGTACACATTTGCATTTTATATGTTTGGAGATGAGTTGTTTAAGGATGAAATGACAGTCAAGGAAAGGGAAATAAAGCAGCACTTATTTGAGGATCAACAGCAGCAGCTTGAGTCAAATGTTGAAAGGCTCTCCAAAATTTTGGAGGAGCCCTTTGATCAGTTTAAAGATGATAAGATTATGGATATAAGGATGCAAGTCATCAATTTGTCAGTAATTATTGACAAACTTTGTCAGAAAATGTATGAATGCATTGAGAATGATTTGTTGGGTTCTCTCCAGCTTGGCACCCACATTATAGCTCCATACAAGTCGAAGGGCATAGAGAGGGCATCGGAACTTCCAGCTTATTGGACCAATAAAGCCAATATTACCGTGGATGCTCATCAGAATGTTACTGAGTGAAAAAAGATTATTGTATATGCTGCAAGCGTAGGTGGAACAGAAGAAGTTGATCGGCCTTCTGGGTCTGGGAGTTCAGATGAAAGGGGATGCTCTTCTCGTAAGCGTGCTAGAAAGGAGGGTGTTAGTGTTGGGTTTTTTGATCTAAACTTGCCAGCTGAGGTTGTAGACTGAAATTAAGACCTCATATAAGTACAGGTGTACAGGTCTAACATAATTTGTTTGTCCTCTTAGATGAAATCAATCATTTTGGATGTCAAAGTCTTTGTTTACCCTATATGCTTCAAATCTTCCTCTTGGGCATCTCTTCTTGCTTCATCCCTCTTTTTCTTTGTATATGTGCATTACATAATGGATAGGCTAATTTCTACGTGGAAGACTTGAGAGCCATCCTTGAGCACAACTATTGGTTTTCATGTTGAATTTTGAAGTGATGGTAATTACTAAA 2097 0.4015 MEDDYISSGDDYQYYDQESMDDGFENEESDFKLVTVKGPTIQVITRESLLVAQKEDLRKVMDMLSVREHHARTLLIYHRWDVEKLFSVYVDRGKAFLFAEAGVSLDEHCASESSLSSSIMCDICMEDVPSDESTRMDCGHCFCNNCWTEHFIVKINEGQSKRIRCMAHKCNAICDEAVVRNLVSKTQPDMAEKFERFLLESYIEDNKRVKWCPSVPHCGNAIRTEDDQLCEVECSCGLQFCFSCLSEAHSPCSCLMWELWAKKCQDESETVNWMTVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWTNIANHSCGCYKEDQERKSERAKRDLYRYMHYHNRYKAHTDSLKLESKLKETIRVKVALSEERDSRVRDYSWVNNGLCRLFRSRRILSYSYTFAFYMFGDELFKDEMTVKEREIKQHLFEDQQQQLESNVERLSKILEEPFDQFKDDKIMDIRMQVINLSVIIDKLCQKMYECIENDLLGSLQLGTHIIAPYKSKGIERASELPAYWTNKANITGGTEEVDRPSGSGSSDERGCSSRKRARKEGVSVGFFDLNLPAEVVD 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00204 579 SMART ibrneu5 262 329 IPR002867 GO:0008270
Bach11g00204 579 SMART ibrneu5 192 254 IPR002867 GO:0008270
Bach11g00204 579 Pfam Ariadne domain 331 579 IPR045840 -
Bach11g00204 579 SUPERFAMILY RING/U-box 117 204 - -
Bach11g00204 579 Gene3D - 250 498 - -
Bach11g00204 579 FunFam RBR-type E3 ubiquitin transferase 115 206 - -
Bach11g00204 579 FunFam RBR-type E3 ubiquitin transferase 250 498 - -
Bach11g00204 579 SUPERFAMILY RING/U-box 262 320 - -
Bach11g00204 579 CDD Rcat_RBR_ARI1-like 275 328 - -
Bach11g00204 579 ProSiteProfiles TRIAD supradomain profile. 117 331 IPR044066 -
Bach11g00204 579 Pfam IBR domain, a half RING-finger domain 192 254 IPR002867 GO:0008270
Bach11g00204 579 SUPERFAMILY RING/U-box 192 260 - -
Bach11g00204 579 MobiDBLite consensus disorder prediction 534 550 - -
Bach11g00204 579 CDD BRcat_RBR_ANKIB1 199 263 - -
Bach11g00204 579 CDD RING-HC_RBR_TRIAD1 120 172 - -
Bach11g00204 579 MobiDBLite consensus disorder prediction 534 560 - -
Bach11g00204 579 ProSiteProfiles Zinc finger RING-type profile. 121 169 IPR001841 -
Bach11g00204 579 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 206 IPR013083 -
Bach11g00204 579 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 42 412 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00204 Bach-Chr11 1460876 1464557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00204 61 548 ARIADNE family AT2G16090 72.709 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00204 K11968 - qsa:O6P43_030968 981.859