Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00182 ATGGGAGACAACAGCACTAACAGCCCTCCTCCGCCTGATTCTGAATCACCACCACCACCATCTAACAATAATGATGATAATAACTCTTCATCACCACCGTCACCAGAGCAATCGCAATCGGGATCTCCACCGCCACAGTCTTCTCCTCCACCGCCAGAGCAATCTTCACCACCCTCGCCTCCGCCACCATCGTCAGGTGATAGTAGCAAATCACCACCCCCACCCTTCAATGATAGTGGTGGAAATAACTCTTCTCCGCCCCCAAGTCCGTCTAATTCTAACAATGACGGTGGAGGGAAATCTTCAAACACACCACCTTCACCACCAAATGCGTCGAACCAAGTGTTCTCACCTCCCCCTCCACCTCATCGATTGTCTCCATCGGAACAAAATTCATCGCGTCATGGCTCATCAAAGTCAACTTCGGAAGGTTCGCCACCGTCAGAGGGCAGTAGCGGAAATGCATTAAGTGAAAATGCTATAATAGGAATAGCTGTTGCGGCTGGGGTAGTGATTTTTCTCATAGTATTACTCATCTATTGCTGTTCGAGAAAGAAGAAGAGATCTCAGAATATTCATTACTACCCTAATCATCCTGGTCATGATGAGTATTTCAAACGACCAGCACCTCCAAATCATCAACAGTGGAATTCCAGTGGTGATCACATTGTCACTATACCACCACCCCCAGGTGCAGCTCAAAAGAGTTGGACACCATCACCTCAAATACCTTATCAGATGCCTAGCAGTGACATGATGAGCAACTCCAGTTATTCTGGCCCACATGGTCCCGCATTGCCCCCTCCACACCCTTCAGTGGCTCTTGGATTCAATAAGAGTACCTTCTCTTTCGAGGAGCTATCAGCTGCTACTGGCGGCTTTGCCTCAAATAATCTTTTGGGTCAAGGTGGGTTCGGCTATGTGCACAAAGGTGTGTTGCCTAATGGTAAAGAGATAGCTGTCAAGAGTCTCAAATCGACTGGAGGCCAAGGAGACAAAGAATTCCAAGCCGAGGTTGATATTATTAGCCGTGTCCACCACCGTCATCTTGTGTCACTGGTTGGCTACTGCTTTTCAGAAGGCAAAAAGCTGTTAGTGTATGAATTTGTGCCTAACAAAACCTTTGAATACCACCTTCACGGAAAAGGTCGTCCTGTTATGGATTGGGGCACTAGGCTGAAAATTGCGATTGGATCAGCTAAAGGACTTGCTTACTTGCACGAGGACTGTCACCCTCGTATCATTCACCGTGACATAAAGGGTGCAAACATTCTAATCGACAACAATTTTGAAGCTAAGGTTGCAGATTTTGGTTTGGCCAAGTTTAATCAAGATAATTACACTCATATTTCTACTCGCGTAATGGGAACATTTGGGTATTTGGCTCCTGAGTATGCATCGAGTGGTAAGTTAACTGAGAAGTCCGATGTCTTCTCCTACGGTATTATGCTCTTGGAGCTTATATCGGGACGGCCACCTGTGGATACCGCCGGTGAATACGAGGACGACAGTTTAGTTGACTGGGCTAGACCTCTATGTATAAACGCAATGGAAACTGGAAACTTTGAAGGATTGGTCGATCCACGCCTGGAGAACAATTATGATAGGAGTGAGATGACACGCATGATAGCTTGTGCTTCTGCAAGTGTAAGACACTCGGCAAGAAAGCGGCCAAAAATGAGCCAGATTGTACGTGCATTGGAGGGTGATGTCTCTCTGGATGACTTGAGTGAGGGGGGAGTGAAACCTGGCCAAAGTACAGTCTTTGGTGGTGCTAGTGGTGAATATGATGCCAGCGCATACAGTGCTGACATGAAGAAATTCAGAAAGCTGGCATTCGATAGCAGCTATGACAGCAGTGAGTTTGGGGGAACGAGTGAGTATGGGCTAAACCCTTCAGCCTCAAGCAGTGACAGATCTTCAGAATATGGCAAGAGGACAGGAAGCCGGATGCACAGTCCCTAA 1965 0.4712 MGDNSTNSPPPPDSESPPPPSNNNDDNNSSSPPSPEQSQSGSPPPQSSPPPPEQSSPPSPPPPSSGDSSKSPPPPFNDSGGNNSSPPPSPSNSNNDGGGKSSNTPPSPPNASNQVFSPPPPPHRLSPSEQNSSRHGSSKSTSEGSPPSEGSSGNALSENAIIGIAVAAGVVIFLIVLLIYCCSRKKKRSQNIHYYPNHPGHDEYFKRPAPPNHQQWNSSGDHIVTIPPPPGAAQKSWTPSPQIPYQMPSSDMMSNSSYSGPHGPALPPPHPSVALGFNKSTFSFEELSAATGGFASNNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDKEFQAEVDIISRVHHRHLVSLVGYCFSEGKKLLVYEFVPNKTFEYHLHGKGRPVMDWGTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILIDNNFEAKVADFGLAKFNQDNYTHISTRVMGTFGYLAPEYASSGKLTEKSDVFSYGIMLLELISGRPPVDTAGEYEDDSLVDWARPLCINAMETGNFEGLVDPRLENNYDRSEMTRMIACASASVRHSARKRPKMSQIVRALEGDVSLDDLSEGGVKPGQSTVFGGASGEYDASAYSADMKKFRKLAFDSSYDSSEFGGTSEYGLNPSASSSDRSSEYGKRTGSRMHSP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00182 654 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 167 615 IPR047117 -
Bach11g00182 654 MobiDBLite consensus disorder prediction 1 154 - -
Bach11g00182 654 Pfam Protein tyrosine and serine/threonine kinase 297 566 IPR001245 GO:0004672|GO:0006468
Bach11g00182 654 SMART serkin_6 294 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00182 654 FunFam proline-rich receptor-like protein kinase PERK1 272 369 - -
Bach11g00182 654 MobiDBLite consensus disorder prediction 127 154 - -
Bach11g00182 654 FunFam Proline-rich receptor-like protein kinase PERK1 370 578 - -
Bach11g00182 654 Gene3D Transferase(Phosphotransferase) domain 1 370 576 - -
Bach11g00182 654 MobiDBLite consensus disorder prediction 203 271 - -
Bach11g00182 654 Gene3D Phosphorylase Kinase; domain 1 271 369 - -
Bach11g00182 654 MobiDBLite consensus disorder prediction 20 36 - -
Bach11g00182 654 MobiDBLite consensus disorder prediction 111 126 - -
Bach11g00182 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Bach11g00182 654 MobiDBLite consensus disorder prediction 236 261 - -
Bach11g00182 654 SUPERFAMILY Protein kinase-like (PK-like) 272 567 IPR011009 -
Bach11g00182 654 MobiDBLite consensus disorder prediction 71 110 - -
Bach11g00182 654 MobiDBLite consensus disorder prediction 37 70 - -
Bach11g00182 654 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Bach11g00182 654 ProSiteProfiles Protein kinase domain profile. 294 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00182 654 MobiDBLite consensus disorder prediction 618 642 - -
Bach11g00182 654 MobiDBLite consensus disorder prediction 616 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00182 Bach-Chr11 1337406 1340327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00182 139 645 Trihelix Transcription Factor Family AT1G70460 49.524 4.63e-155 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bach11g00182 PK_Tyr_Ser-Thr 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00182 - - gmx:100806299 727.628