Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00171 ATGGTGGATCGGCGAAGCATAGTGTCTTTTGGGTTCTTGTTCTTGTTGTGGTTTCAGCTCACATTTGAGCAGCTTGAGCCACTGAGTTCACCCACAGAGCGAGCAGCACTACTTGAGCTTAGATCGTCTTTGGGCTTGAGGAGCAAGGAATGGCCAAGAAAGGCCGAGCCTTGTTCTATCTGGATAGGCGTGCAGTGCGAGAATGGTAGAGTTGTTGGAATCAATATTTCTGGGTTTAGAAGAACCCGAATTGGGCGGCGAAACCCACAATTCGCAGTCGATGCCTTGGCCAATTTCACGTTCTTGCAGTCCTTTAATGCTTCCAATTTTCTTCTCCTTGGTCCTATTCCTGACTGGTTTGGCCAGCGGCTTCCCTCCCTAAGAGTGCTTGATCTTCGTTCTTGCTCTATCAATGGTTCTATTCCTTCCAGTCTTGGGAATTTAACCAGCCTAACTAGTCTATATCTATCTGAAAATAGCCTTACTGCCCAAATTCCTGATACTTTGGGTCAACTATTAGGCCTTTCAGTACTTGATCTTTCGCAAAATTCTCTTACTGGGTCCATACCCTCAAGGTTTACGTCTCTGGGGAATCTTTCATCTCTTGACATTTCTGCCAACTCCTTTTCCGGGCCGATTCCCCCTGGCTTTGGGACTCTGTCCAAGTTACAATACTTGAATCTTTCCCACAACAATCTAACTTCTTTCATACCTGCTCAACTGGGGAATCTCAGTAGCTTGGTTGACCTTGATCTTAGTGTTAATTCATTGTCTGGTCTGGTGCCTTCGGATTTAAAAGATTTGAGGAACTTGAACAGATTGATACTTGGGAACAATACACTTAGTGGACCTTTTCCAGAGAACATGTTTCAAAGTTTATTGCAGTTGCAGTTCATAGTGCTGAGTCATAATAATATCTCTGGTGCTTTGCCTGATGAATTGTGGTCTCTGCCAAGATTGCGCTTCCTTGATGTCTCCTGGAATAACTTTACTGGTATGCTTCCAAATTCTAGTCTCATCGCTAATGCTACTGCTGCGGAGCTCTATATTTCTCATAATATGTTTTATGGAGGCCTGACTCCTGTACTTCGAAGGTTCAGTTTCATTGATCTGTCAAGCAATTATTTTGAGGGCACGGTTCTGGATTTCATGCTTAATAATGCATCTCTAGACAGCAACTGCCTCCAAAATGTGTCAAATCAAAAGTCATCTGAAGAATGTGCGTCATTCTATACTGAGAGGGGCCTGGCTTTTGATAATTTTGGACGCCCAAATTCGACAGAACCTCCTGCTGCAGCAGAGAATGGTGGAAAGAGCGATAGAAATAAAATTATATTGGCAGCGGTCTTGGGTGGGTTTGGTTTAATTGGACTTCTGCTGTTGGTACTGATATTGCTACTTTTGTGTGTTCGAAAGAGGCGCAACTCTAATCACAGAGGAAATGGTGTTGGCCCTGCTCCAGCTGGGGGAAGTCCTCCGCCTCCTGGGGTATTAATCAACTTTTCAAATGTAGGAGACTCATTTACATACCAGCAGCTGCTCCAGGCCACAGGTTTCAGCGATTCAAATCTTATCAAACATGGCCACACCGGGGACCTTTTCAATGGTGTTTTGGAAAGTGGACTTCCGGTAGTCATCAAAAGGATTGACATGCGTTCAAATAAAAATGATGCATATATAACGGAATTGGACTTTTTCAGCAAGGTTTCCCATGCAAGATTTGTTCCCCTGTTGGGACATTGCTTAGACAATGAAAATGAGAAGTTCCTGCTTTATAAACATATGCCAAATGGAGACTTGTCAAATTGTTTGTACAGAAATACTACATCAGAAGATGGTACTTTGCAGTCGTTGGATTGGATAACTAGATTGAAAATTGCCACTGGAGTGGCAGAAGGTCTTTCTTATCTGCATCATGAATGTAATCCACCCTTTGTTCACAGAGATATACAAGCGAGCAGTATACTATTAGATGATAAATATGAAGTGCGGTTGGGGAGCCTAAGTGAAGTTTGCACTCAAGAAGGTGATCCTCATCAAAGCAAGATTACGCGGTTACTGAGGCTGTCCCAGTCCTCCGAGCAAGGTACATCTGGTTCATCCACATCAATTTGTGCCTATGATGTGTATTGCTTTGGGAAAGTATTACTTGGCTTGGTGACCGGTAAGCTTGGAATCAGCTCCTCCAGTGATGATGAAGAAAAGGAATGGTTGGAACGGACGCTATCATGCATTACTATTTATGATAAGGAGCTTGTGACAAAAATCGTGGATCCATCTATGATAGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCTGTGGCCATTGTGGCTAGGTCTTGCTTGAACCCCAAACCTTCGAAACGACCACCAATGAAATATGTTCTTAAGGCTCTGGAAAACCCTTTAAAAGTGGTAAGGGAGGAAAATTACAGCTCTGCACGGCTTAGAGCAACATCTTCTAGAGGCTCTTGGAATGCAGCTTTGTTTGGTAGTTGGCGTCAAAGTTCATCTGATGTAACAGTAATTCCAGCAGCCTCTGGTGCAAGAGTAGAAGGAGGGAGTAGCTTAAAGCATTCAGGAACTACTGGATCACAGGGTAGCAACAACAATGGTGGGGGTGACTTGTCATCATCACGAAGACGACACTCGAAGGAGATATTCCCAGAACCATCAAATGTTCAAGATGTGGAGAGGCTGGAGCATGAGTAG 2712 0.4373 MVDRRSIVSFGFLFLLWFQLTFEQLEPLSSPTERAALLELRSSLGLRSKEWPRKAEPCSIWIGVQCENGRVVGINISGFRRTRIGRRNPQFAVDALANFTFLQSFNASNFLLLGPIPDWFGQRLPSLRVLDLRSCSINGSIPSSLGNLTSLTSLYLSENSLTAQIPDTLGQLLGLSVLDLSQNSLTGSIPSRFTSLGNLSSLDISANSFSGPIPPGFGTLSKLQYLNLSHNNLTSFIPAQLGNLSSLVDLDLSVNSLSGLVPSDLKDLRNLNRLILGNNTLSGPFPENMFQSLLQLQFIVLSHNNISGALPDELWSLPRLRFLDVSWNNFTGMLPNSSLIANATAAELYISHNMFYGGLTPVLRRFSFIDLSSNYFEGTVLDFMLNNASLDSNCLQNVSNQKSSEECASFYTERGLAFDNFGRPNSTEPPAAAENGGKSDRNKIILAAVLGGFGLIGLLLLVLILLLLCVRKRRNSNHRGNGVGPAPAGGSPPPPGVLINFSNVGDSFTYQQLLQATGFSDSNLIKHGHTGDLFNGVLESGLPVVIKRIDMRSNKNDAYITELDFFSKVSHARFVPLLGHCLDNENEKFLLYKHMPNGDLSNCLYRNTTSEDGTLQSLDWITRLKIATGVAEGLSYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEVCTQEGDPHQSKITRLLRLSQSSEQGTSGSSTSICAYDVYCFGKVLLGLVTGKLGISSSSDDEEKEWLERTLSCITIYDKELVTKIVDPSMIVDEDFLEEVWAVAIVARSCLNPKPSKRPPMKYVLKALENPLKVVREENYSSARLRATSSRGSWNAALFGSWRQSSSDVTVIPAASGARVEGGSSLKHSGTTGSQGSNNNGGGDLSSSRRRHSKEIFPEPSNVQDVERLEHE 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00171 903 Gene3D Ribonuclease Inhibitor 190 290 IPR032675 -
Bach11g00171 903 Gene3D Ribonuclease Inhibitor 291 413 IPR032675 -
Bach11g00171 903 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Bach11g00171 903 MobiDBLite consensus disorder prediction 851 903 - -
Bach11g00171 903 Pfam Protein tyrosine and serine/threonine kinase 525 797 IPR001245 GO:0004672|GO:0006468
Bach11g00171 903 ProSiteProfiles Protein kinase domain profile. 519 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00171 903 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Bach11g00171 903 FunFam Putative LRR receptor-like serine/threonine-protein kinase 595 819 - -
Bach11g00171 903 MobiDBLite consensus disorder prediction 856 877 - -
Bach11g00171 903 PANTHER LEUCINE RICH REPEAT KINASE 2 222 802 - -
Bach11g00171 903 Gene3D Phosphorylase Kinase; domain 1 498 594 - -
Bach11g00171 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Bach11g00171 903 Pfam Leucine rich repeat 150 208 IPR001611 GO:0005515
Bach11g00171 903 Pfam Leucine rich repeat 269 330 IPR001611 GO:0005515
Bach11g00171 903 Pfam Leucine Rich Repeat 222 244 IPR001611 GO:0005515
Bach11g00171 903 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515
Bach11g00171 903 SUPERFAMILY L domain-like 84 418 - -
Bach11g00171 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 292 423 - -
Bach11g00171 903 FunFam Predicted protein 491 594 - -
Bach11g00171 903 ProSiteProfiles Leucine-rich repeat profile. 222 245 IPR001611 GO:0005515
Bach11g00171 903 SMART LRR_typ_2 317 340 IPR003591 -
Bach11g00171 903 SMART LRR_typ_2 124 147 IPR003591 -
Bach11g00171 903 SMART LRR_typ_2 148 172 IPR003591 -
Bach11g00171 903 SMART LRR_typ_2 220 243 IPR003591 -
Bach11g00171 903 SMART LRR_typ_2 244 267 IPR003591 -
Bach11g00171 903 SMART LRR_typ_2 196 219 IPR003591 -
Bach11g00171 903 SMART LRR_typ_2 268 292 IPR003591 -
Bach11g00171 903 SMART LRR_typ_2 293 316 IPR003591 -
Bach11g00171 903 SUPERFAMILY Protein kinase-like (PK-like) 510 799 IPR011009 -
Bach11g00171 903 PRINTS Leucine-rich repeat signature 220 233 - -
Bach11g00171 903 PRINTS Leucine-rich repeat signature 175 188 - -
Bach11g00171 903 Gene3D Transferase(Phosphotransferase) domain 1 595 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00171 Bach-Chr11 1275441 1279834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00171 32 691 Miscellaneous Gene Families AT2G16250 57.744 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Bach11g00171 PK_Tyr_Ser-Thr 6.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00171 - - qsa:O6P43_011595 1261.13