Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00170 CTCGTTTCTTGTTCTGCCCTAGTTTTTGGGGTTTATATTCTTTCTTCTCAAAATCAATGGCTTCCGCTGACGTTGAGTTTAGATGCTTTGTTGGTGGGCTCGCATGGGCCACCGACAACGATGCTCTCCAGAGCGCCTTCTCCCCCTATGGCGACATCGTCGATTCGAAGGTTATCAACGATCGTGAGACCGGAAGGTCAAGAGGTTTCGGATTCGTCACCTTCTCTTCCGAGCAGGCTATGAGGGATGCCATAGATGCTATGAACGGCAAGGAGCTTGATGGCCGTAATATTACTGTTAATGAGGCTCAGTCCCGCGGAAGGAGCAGTGGTGGCGGTGGATATGGCGGCGGTGGTGGCGGGTACGGTGGAGGCGGCGGAGGGTACAGCCGTGGTGGAGGTGGATACGGAGGTGGCCGCCGCGACGGTGGCTACAACCGCAATGGCGGCGGCGGCGGCAGTTACGGTGGTTATGGTGGCGGACGTGACCGTGCGGGTTACGGTGACGGCGGATCTCGCTACTCTAGGGGTGGCGGTGCTTCTGAGGAAACTTGGAGGAATTAAGATTAGATATTAGCTGCAGGGGTATGAGGTTATGTTGGCTTGCGTTGGGTTTGAGGTTATATCGTAGTTTTTAGTGGTTAGGTTTCCTTGATTTTGCTCTGGTTCCTGTTCCTGTTCCTGTTCCTGTCCTTGTGATCTTCGTTTTTGGCCTAAGAATTGTGTACTTGGTTGTTTAATACAATCGATCTTAATGGTTTAGTCAAGATTGTTACTATAA 780 0.5179 MASADVEFRCFVGGLAWATDNDALQSAFSPYGDIVDSKVINDRETGRSRGFGFVTFSSEQAMRDAIDAMNGKELDGRNITVNEAQSRGRSSGGGGYGGGGGGYGGGGGGYSRGGGGYGGGRRDGGYNRNGGGGGSYGGYGGGRDRAGYGDGGSRYSRGGGASEETWRN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00170 168 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Bach11g00170 168 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 156 - -
Bach11g00170 168 SMART rrm1_1 9 82 IPR000504 GO:0003723
Bach11g00170 168 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Bach11g00170 168 CDD RRM2_NsCP33_like 9 84 - -
Bach11g00170 168 Gene3D - 2 119 IPR012677 -
Bach11g00170 168 FunFam Glycine-rich RNA-binding protein GRP1A 2 111 - -
Bach11g00170 168 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Bach11g00170 168 MobiDBLite consensus disorder prediction 74 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00170 Bach-Chr11 1265528 1266572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00170 10 87 Eukaryotic Initiation Factors Gene Family AT2G23350 37.179 1.37e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00170 - K13195 qsa:O6P43_001900 156.377