Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00148 ATGAAGCTATTTGCTGAAGGAAAAGAGTGTAATAGCTCTGAAGTTTCTTCAAAATTGCATGATCGTGATGATAAAGTATATAGACAAAAAAGGCGAGCACTTGATGATTTTGACTTGTACTCTGTACCCAAAATGCTGGAAGGGCTAAATACAAGTAAGTTTGGAAGTGTGGCGAAAGATATAGAAGCTCTTTGTGCTAGAAGGTTGCAAGTCCTGAAATATGATCCCATGATGAATTCCAAATGTTCAAATAGACTTTGTGAACAGTCAAATTCAAAAAATTGGAGAGCAAATCAGTTAGAACAAGCCAGTGCCATTAGTTTACAGGATGGCCGTTCCTGGGATAATACATCAGCAGCAGCATCACCTGTTATATACCTTTGTTCGGATGATGAACATGGTGGAGATACAAGGCATATTCATCCATTTTTTGAGCAGGCTTTGCTGAAAGAGACTGCTAGTAAGGTTAAAGATGATTCACAGTGCAAAGCTCAACAGGAGGAGGAGGTAGATGCAGGCCAAAGCAATATAGGAAGAAACAATGGTACAGATCTTGCTACAGGAGACGATCAAGTAATTCTGGAAAATAATATCCAAGATTTCTCAGGAAAGGAAGGATGTAATGACATCGAAGCTGAAGATGATAGAATGGCAGATACAGAAGACAAATCTCCAATGGGAAGTGTGGTTCTGGATAGTAATCTCCAAGCTTTCACGGGAAAGGAAAATTACATTGAAACTGAAGACACCAGAATGGCAGATACAGAGAGAGAATATCCTATAAGAAATGTGGATCGGGAAAATAATCTCCAGACTTACTCACGAAAGAAAAGACGCCATCTAATTGAAACTGAAGATCAAAGAATGGCATTTATAGAGAGCAAGTCTTTAATGGAAAATGTGGCACAACCGGAACTCAAAACTGATAATCAGAACCTTAAATATGGCTATACATGTGCAGACAATGATATTGCGGGTAAAGGAGATTTAACAAATTTATGGAGTGAGATGGTGGTTGCATTAGGATGTAGCGAGGAAAATAATGGAGATCCTTCGACAGTTGAGCGAGCAGAAGATGAAGGGTGTGATCATTCTTTAGTCTTAAAGGATGATATTGGTTATGTATGTCGAATTTGTGGAATCATTAAGACAGGAATCGAATCTATCTTTGAGTTCTCATACAACAAGGGCAAAAGGACTTCACGAACTTATGCTTCTGAAATTAGAAATGCAATTGACAGAGGATCAACCAAGATTTTACCTATTAGAGTTAAAACTTCTATTGAGGAACTAATGGTAACTGAAGTTGCTGCTCATCCAAGGCATATGAGGCAAATGAAGCACCATCAATTGGAGGGCTTCAATTTTTTATGTAGCAATCTGACAACTGATAACCCAGGTGGTTGCATCCTAGCTCATGCTCCAGGTTCTGGAAAGACTTTTATGATTATAAGTTTTATGCAGAGTTTCCTAGCAAGGTCCCCAAATGCTCGACCACTAGTTGTTCTACCGAAAGGAATTTTAGCAACATGGAGGAAAGAATTCCAGATATGGCAAGTGGAGGACACTCCATTGTATGATTTTTATACTTTTAAAGCAGATAAACGGGCTCAGCAGCTGGGAGTATTGAGAAAATGGGTAGAGCAGAAAAGTATCATGTTTTTGGGGTATCAACAATTTTCTACCATCATATGCGATGATGGGACAGACAAGGCAGCAGTAGAGTGTCGAGAGATTCTACTGAAAATCCCCGCGATACTTATTCTAGATGAAGGTCATACTCCAAGGAATGAAGACACTAATATGCTTCAGTCTCTAGCAAGAGTCGAAACACCTCTTAAAGTTGTATTATCAGGCACTCTATACCAAAACCATGTGAAGGAGGTATTCAATATTCTGAATCTTGTTCGACCAAGGTTCATGAAACTGCAGACTTCTCGTGACGCTGTTAGGCGCATAATGTGCAAAGTGCAGATACAAGGCACGAAAAAGCTATCCTCAGAGTCGACATTCTTTGATTTGGTGGAGCAAACACTACAACAGAAGGACGATTTTAAAAGGAAAGCAGCTGTCATACAAGATCTTCGTGAAATGACTAGCAAAGTCCTTCATTACTATAAAGGTGACTTTCTTGAAGAGCTTCCTGGTCTTGTTGATTTCACTTTGATACTCAATCTCAGTGAAAAGCAGAAAAGTGAAGTTGAAAACTTAAAGTCGGTCTCCACCTTCAAGAGATTTTCTTTGGGAAGTCTCTTGTATGTGCACCCATGTTTGAAATCCTTTTCAAGGAAATACCCCTCAAATGGAGATAAGGGCTTCTCCATTGACGAAGAAAAGATAGATGTTGTGGTAAAAAAGCTGATTGTAGAAGATGGGGTGAAAACAAAGTTCTTTCTTAAGATAGTGAGTCTGTGTGAATCAACTAGTGAGAAACTGTTGGTATTTAGCCAGTATATTCTGCCCCTGAAACTTTTTGAGAGATTGACAATTAAATTAAAGGGCTGGAGTCGTGGTAAAGAAATTTTCATGATTACGGGAGATTCAAATAATGAACAAAGGGAATGGTCCATGGAACGTTTTAACAACTCTCCTGATGCTAAAGTGTTCTTTGGGTCAATCAAGGCTTGTGGGGAAGGAATCTCTCTGGTGGGTGCTTCTCGCATCATTATATTGGATGTTCATCTTAATCCATCAGTAACGCGCCAAGCAATAGGCCGTGCATTCCGACCTGGGCAGAAGAGAAAAGTGTACACTTACAGGTTGATTGCTGCTGATTCACCTGAGGAAGAAGATCACAGCACTTGCTTCAGAAAGGAGTTGATATCAAAGATGTGGTTTGAGTGGAATAACAAATCTATGAACCAAGAATTTGATATGAAGGCTGTCCATGTTGACGAGTGTGGCGATCCGTTCTTGGAAAGTATGTCATTGCGGGAAGATTTAAAGGTTATATACAAGAGGTAA 2964 0.3944 MKLFAEGKECNSSEVSSKLHDRDDKVYRQKRRALDDFDLYSVPKMLEGLNTSKFGSVAKDIEALCARRLQVLKYDPMMNSKCSNRLCEQSNSKNWRANQLEQASAISLQDGRSWDNTSAAASPVIYLCSDDEHGGDTRHIHPFFEQALLKETASKVKDDSQCKAQQEEEVDAGQSNIGRNNGTDLATGDDQVILENNIQDFSGKEGCNDIEAEDDRMADTEDKSPMGSVVLDSNLQAFTGKENYIETEDTRMADTEREYPIRNVDRENNLQTYSRKKRRHLIETEDQRMAFIESKSLMENVAQPELKTDNQNLKYGYTCADNDIAGKGDLTNLWSEMVVALGCSEENNGDPSTVERAEDEGCDHSLVLKDDIGYVCRICGIIKTGIESIFEFSYNKGKRTSRTYASEIRNAIDRGSTKILPIRVKTSIEELMVTEVAAHPRHMRQMKHHQLEGFNFLCSNLTTDNPGGCILAHAPGSGKTFMIISFMQSFLARSPNARPLVVLPKGILATWRKEFQIWQVEDTPLYDFYTFKADKRAQQLGVLRKWVEQKSIMFLGYQQFSTIICDDGTDKAAVECREILLKIPAILILDEGHTPRNEDTNMLQSLARVETPLKVVLSGTLYQNHVKEVFNILNLVRPRFMKLQTSRDAVRRIMCKVQIQGTKKLSSESTFFDLVEQTLQQKDDFKRKAAVIQDLREMTSKVLHYYKGDFLEELPGLVDFTLILNLSEKQKSEVENLKSVSTFKRFSLGSLLYVHPCLKSFSRKYPSNGDKGFSIDEEKIDVVVKKLIVEDGVKTKFFLKIVSLCESTSEKLLVFSQYILPLKLFERLTIKLKGWSRGKEIFMITGDSNNEQREWSMERFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKRKVYTYRLIAADSPEEEDHSTCFRKELISKMWFEWNNKSMNQEFDMKAVHVDECGDPFLESMSLREDLKVIYKR 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00148 987 Gene3D - 418 684 IPR038718 -
Bach11g00148 987 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 16 986 IPR044567 GO:0080188
Bach11g00148 987 MobiDBLite consensus disorder prediction 167 189 - -
Bach11g00148 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 655 IPR027417 -
Bach11g00148 987 MobiDBLite consensus disorder prediction 159 189 - -
Bach11g00148 987 SMART ultradead3 442 653 IPR014001 -
Bach11g00148 987 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 800 965 IPR001650 -
Bach11g00148 987 Pfam SNF2-related domain 461 732 IPR000330 GO:0005524|GO:0140658
Bach11g00148 987 SMART helicmild6 826 911 IPR001650 -
Bach11g00148 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 586 953 IPR027417 -
Bach11g00148 987 CDD SF2_C_SNF 778 922 - -
Bach11g00148 987 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 460 639 IPR014001 -
Bach11g00148 987 Pfam Helicase conserved C-terminal domain 803 910 IPR001650 -
Bach11g00148 987 Gene3D - 715 976 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00148 Bach-Chr11 1087014 1091396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00148 808 939 RAD5 or RAD16-like Gene Family AT5G43530 36.364 3.53e-14 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach11g00148 SNF2_N 2.3e-19 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00148 K10875 - qsa:O6P43_001867 1007.28