Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00147 ATGCTTTGTCCAAGGGAACCAGCTCTGCCTAACTCATATCCTGAAACACCAATTCTTCCTAGTAATATAACATTGTATATGAACGCTGGGTCATATCCAGATGCAATGTCTGACAATTCTCTGCGTCAAAATAACTGCTTTGTGATTCCTTCTATTGGTGCATCACATTCAACTCCTGCACAGCAAGGAATATTAGCAAACCTAAGTGGATTACAAAGTGGGGGACATGATTTCATTGCTTGGAGGGAGGGTAGAAATGAGATGCTAGTTACACATTCAGTGGATGGACAGAACTTGCAGGGTCGGGGATTATCTCTGAGTCTTGGAACCCAAATACCTTCAGGAATCCAAATTCCATCTACCCATGAACGTAATCCTAATCTGAATTTTGATTCTTTTTTGGGTCCTAATCCATCAATTCCAGGTGATGGGAGCTATAAAAGTGGCTCCAGGGATCAACGTTTTTGGCATTCCGAAACTTTGCCACCTGGTTTTCCTGAAGGTAACCAAGAATTGCACATGGGGGGTTTTTCTGTGCATGGAATGTCTGGTCTTGCGCGAACAATTCCTGATTCCAAATACCTGAAGGCAGCACAACAACTGCTTGATGAAATGGTTGACATCCGAAAAACCGTAAAACAACCTAATGTGAAAAGTCATAGAACACATGAGGACTATAAAGAGAGTTCCAAGGAGGAGGATGATGGGAGACCAGAAAATGAAAAGGCACCTGCTGATGGAGTGACTGATCATCAAGACTCAGCTAATAACTCTTCTTGTGAGCTTTCACATGCTGAAAAACAAAATTTGCAGAACAAGCTAACGAAACTTCTATCCACGTTGGATGAGGTTGACAGTTGGTACAAGCGATATTATCATCAGATGCAAATTGTTGTATCATCATTTGATGTGATAGCAGGACGTAGAGCAGCTAAACCATACACAGCGCTTGCTCTCCAAACCATATCTCGCCATTTCCGGTGCTTGAGGGACGCAATCACTGACCAAATCAGTGTAACACAGAAGAACCTTGGAGAGCAAGATGCTTCAGAAAATAATTATAAAGGAGTTGGAATATCAAGACTTCGGTATGTGGACCAACAGAACCGGCAACAGAGGGTTCTTCAGCAACTTGGTATAATGCAACATACATGGAGGCCACAGAGGGGGCTGCCAGAAAGCTCTCTTTCTATTCTTCGCGCTTGGCTGTTCGAGCATTTCCTTCACCCCTATCCAAAGGATTCTGATAAGATCATGCTAGCAAGGCAGACAGGCTTGACCAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGAGTGCGTCTATGGAAACCTATGATTGAGGAAATGTACAAGGAAGAGATTGGTGATACTGACATGGATTCCGGTTGTTCATCTGAAAATGCATCCAAGGGGACAAAAAGTGACATGAAGACGTCCAATGATATGGGTGATGATTTGCAGCACTGTCAAAGCTCAATGGCCAATACGAATTGCAATGATGGAGAAGCAAAAGCAAAGGACTTCGGATCAGATCACATTTTTGCAACAGAAATCACAGGATCTTCTGGATTAGCTACTCTCCATAGTGGTGAAACTGAATACGGGTCATTGTCAATAAAGCAACCTGAGGAACAAAGGTCAAATTTTGATGATTGTGGTCTCTACCCTGATGACAGTGACGCAGTTGTTCAAACGAATGGAGGCAATAGAAGGTTTATGGCAGTTGCTGCTACATGCAAAGTGTCAGAGTTGGGAAAGTTTGAGACGGGAAGTGGAGTGTCTCTCACATTAGGTTTGCAGCGCTGTGAGGGTGGTAATCGTATGTCTAGCGAAACTCATAGTTTTGTTGCCATGAGGGAGGATGACGTCTACAGTTCTGCTGCAGCTTCTTCAATAGGGACTGAGACAGCAGAACTTGGATGTATCACTAATGGAAGCCAGCAGCGAAGGTTCTCTTCACCTCATTTATTACATGATTTTGTAGTATAAGGGCAATAAGTTGCAATTATTACTGATAGTCTCCGTTAATCTTAAATAAAATGAACAGTGCTG 2055 0.4277 MLCPREPALPNSYPETPILPSNITLYMNAGSYPDAMSDNSLRQNNCFVIPSIGASHSTPAQQGILANLSGLQSGGHDFIAWREGRNEMLVTHSVDGQNLQGRGLSLSLGTQIPSGIQIPSTHERNPNLNFDSFLGPNPSIPGDGSYKSGSRDQRFWHSETLPPGFPEGNQELHMGGFSVHGMSGLARTIPDSKYLKAAQQLLDEMVDIRKTVKQPNVKSHRTHEDYKESSKEEDDGRPENEKAPADGVTDHQDSANNSSCELSHAEKQNLQNKLTKLLSTLDEVDSWYKRYYHQMQIVVSSFDVIAGRRAAKPYTALALQTISRHFRCLRDAITDQISVTQKNLGEQDASENNYKGVGISRLRYVDQQNRQQRVLQQLGIMQHTWRPQRGLPESSLSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIGDTDMDSGCSSENASKGTKSDMKTSNDMGDDLQHCQSSMANTNCNDGEAKAKDFGSDHIFATEITGSSGLATLHSGETEYGSLSIKQPEEQRSNFDDCGLYPDDSDAVVQTNGGNRRFMAVAATCKVSELGKFETGSGVSLTLGLQRCEGGNRMSSETHSFVAMREDDVYSSAAASSIGTETAELGCITNGSQQRRFSSPHLLHDFVV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00147 663 SMART prehox3 183 335 IPR006563 -
Bach11g00147 663 Pfam Associated with HOX 189 334 IPR006563 -
Bach11g00147 663 MobiDBLite consensus disorder prediction 250 264 - -
Bach11g00147 663 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 104 471 - -
Bach11g00147 663 Gene3D - 381 459 - -
Bach11g00147 663 MobiDBLite consensus disorder prediction 136 173 - -
Bach11g00147 663 Pfam Homeobox KN domain 402 441 IPR008422 GO:0003677|GO:0006355
Bach11g00147 663 MobiDBLite consensus disorder prediction 213 264 - -
Bach11g00147 663 MobiDBLite consensus disorder prediction 458 483 - -
Bach11g00147 663 SUPERFAMILY Homeodomain-like 386 453 IPR009057 -
Bach11g00147 663 MobiDBLite consensus disorder prediction 461 477 - -
Bach11g00147 663 ProSiteProfiles 'Homeobox' domain profile. 382 445 IPR001356 GO:0003677
Bach11g00147 663 CDD homeodomain 385 446 IPR001356 GO:0003677
Bach11g00147 663 SMART HOX_1 385 449 IPR001356 GO:0003677
Bach11g00147 663 MobiDBLite consensus disorder prediction 213 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00147 Bach-Chr11 1082911 1085621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00147 12 663 Homeobox Transcription Factor Family AT4G34610 41.317 3.23e-128 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach11g00147 POX 6.1e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00147 - - gmx:100801522 805.438