Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00146 ATGGCTAAACCAAAGGCTGGAAGACGAACCCTAGAGTCATACACAGTCAAACACATTAACAAAACTATTAGAGCCGGCGACTGCGTGCTCATGCGGCCGGCCGATTCCTCGAAGTCATCGTACGTGGCAAGGATCGATCGGATCGAAGCGGACTCGCGAGGCGCTAACGTGAAGGTTCACGTCCGTTGGTACTACCGACCGGAGGAGTCAATCGGCGGTCGTCGCCAGTTCCACGGTTCTAAGGAGGTTTTTCTATCTGATCACTATGATGTTCAGAGCGCCGACACGATCGAAGGCAAGTGTACGGTTCACAGTTTTAAGAGCTACACGAAGCTTGACGCTGTTGGAAATGAAGATTTCTTCTGCCGCTTCGAGTACAATTCGGCCACCGGGGCCTTCAATCCTGACAGAGTCGCCGTGTATTGTAAATGTGAGATGCCCTACAACCCTGATGATCTAATGGTCCAGTGTGAGGGTTGCAGCGACTGGTTTCATCCTACTTGTATAGACATGACTGTGGAGGAAGCTAGAAGACTTGATAACTTCTTTTGTGAAAATTGTTCTGCGGAAGGTCAAAAGGAGTTGCAAAATTCTCATTCTGCCTCGAGACACACAGATATGAAGGTATTTCTAGCCACTGAAGTTCATTTCTGTTTTCAGAATTTAATTGATCTGAATTGGCACATCCTTCGGAAGTAA 699 0.4778 MAKPKAGRRTLESYTVKHINKTIRAGDCVLMRPADSSKSSYVARIDRIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHYDVQSADTIEGKCTVHSFKSYTKLDAVGNEDFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPTCIDMTVEEARRLDNFFCENCSAEGQKELQNSHSASRHTDMKVFLATEVHFCFQNLIDLNWHILRK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00146 232 ProSitePatterns Zinc finger PHD-type signature. 142 187 IPR019786 -
Bach11g00146 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 205 IPR013083 -
Bach11g00146 232 Pfam PHD-finger 141 189 IPR019787 -
Bach11g00146 232 Pfam BAH domain 22 136 IPR001025 GO:0003682
Bach11g00146 232 ProSiteProfiles Zinc finger PHD-type profile. 139 190 IPR019787 -
Bach11g00146 232 SMART BAH_4 21 137 IPR001025 GO:0003682
Bach11g00146 232 SUPERFAMILY FYVE/PHD zinc finger 131 191 IPR011011 -
Bach11g00146 232 Gene3D - 2 133 IPR043151 -
Bach11g00146 232 PANTHER OS08G0421900 PROTEIN 5 208 - -
Bach11g00146 232 ProSiteProfiles BAH domain profile. 21 137 IPR001025 GO:0003682
Bach11g00146 232 SMART PHD_3 141 188 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00146 Bach-Chr11 1074521 1078076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00146 31 127 Core DNA Replication Machinery Family AT4G12620 27.835 6.92e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach11g00146 BAH 3.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00146 K25868 - jre:108986983 414.075