Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00115 AAGCAACCTATCCTCATTCCTGTTGTCGGAAATTCTCTGCAGGGTCGGAGGAGGAGGTGAAGATTTTCATCTTTGTTCGAAATTCTCCGATTCAAGTATGAGCGAAGATGGCAAGAACAGGGGTATCGCCAGCGTCGGTGAGCAGCCGAGCCAGCCATACTATGGCACCTTCCAAGGCGTCGCCAACTACTATCCTCATGTTCCGCAGCCACCATCTCAGCCGGTGGTAGGTTTTCCCCAGCCGATTCCGCCGCCAGGTTCCTTCGGAGGTCCCCGGTATTATCATGATGGTTACCAAATTGTTCCAGTGCAAGGTTATGTTGTTGCTGAAGGAAGGCCCATAAGAGAACATCGTCTTCCTTGCTGTGGACTTGGCCTGGGTTGGTTCTTGTTTATAATTGGATTCTTTCTTGGTGGCGTTCCCTGGTATGTTGGAACTTTCATTCTACTATGTGTACGAATGGATTACCGAGAGAAAGCTGGATTAGTTGCTTGTACTGTTGCTATTTTTGAGAAGAATCCAACCAAGATTGAGAATTATGGTATTTGGTTGAGGTATCAAAGTCGAACAGGATGTCACAACATGTACAAGGAGTATCGTGATGCCACTCTAAATGGTGCTGGCACAGATGTATAA 637 0.471 MSEDGKNRGIASVGEQPSQPYYGTFQGVANYYPHVPQPPSQPVVGFPQPIPPPGSFGGPRYYHDGYQIVPVQGYVVAEGRPIREHRLPCCGLGLGWFLFIIGFFLGGVPWYVGTFILLCVRMDYREKAGLVACTVAIFEKNPTKIENYGIWLRYQSRTGCHNMYKEYRDATLNGAGTDV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00115 179 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 127 177 IPR023573 GO:0003735|GO:0005840|GO:0006412
Bach11g00115 179 SUPERFAMILY RplX-like 142 176 - -
Bach11g00115 179 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 137 IPR044804 -
Bach11g00115 179 Gene3D - 140 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00115 Bach-Chr11 823348 827468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00115 1 136 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 36.612 1.69e-27 100