Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00109 ATGATCCGACGCCGTCGTTTCATCGTTGCAAAAACCCAAAAGAAGAAAATGTTAAGAACAAACGCCGTCGTTCCATTGAAATATATATCGGGACCGTGTTTAGCGCAATCTACTAAGCGCAACTCGGCTTTTGCGGTCGAAACCAAACGGAGCTACCCGCAGACTTTGCCGGACAAGAATAACATGGCGAAGAAAGCTGAACGGTCTGAGAAGTCTCTTTCGTCCCCAAGAGCTTCTTCTGCCTTTGCCAAAGCCTCCGCAAGTGCTTCTAAGGACAAACTAGTTTTGAGGGTAAAATCAAATGTCGGGATGAAGAGACCTGCGAGGCAGACTAAGTCAGCAAAGAAACCCAAAGCAAAGCTAAAGAAGAACCAAAAAAAGTTAGAGGCTAAGAAGCCAAAGAAACCTCCCACTGCTTTCTTCTACTTCTTAGAGGATTTTCGTAAACAATTTCAAGAGGAGAATCCAGATGTCAAGTCAATGCGTGATATTGGCAAAGCCTGTGGAGAGAAGTGGAAAACAATGACATATGAGGAGAAGGTTCAGTACTATGACATAGCGACAGAAAAACGAGCGGAATTTGATAGAGCAATGATAGAATTTAACAAGAGAATGGAAAGTGGAGAGTACGAAGAAGATGAGGAGGATTCAGAGTTTACTGACTAGAGCTGTGTAATTAATGTCTTGTGAAGAGGATTAGACCGATTGAATTGGAGTTACTTTGACCAGAAGTTGTATATCCAATTGTAGTCAATTGTGATTTGTCCTTGTGAATAATTATCACTTGCTGTATCATTTTTGTTCTGTAAAGTGCCGATTGCAATTGTATTCAGATGCTTACAATTGCAGATGTGAGCTTATGTTAGGATGTAGAATGCATAGCACTATGCCAAGTAGAAAGTTTTACCTCTACTACCA 918 0.4118 MIRRRRFIVAKTQKKKMLRTNAVVPLKYISGPCLAQSTKRNSAFAVETKRSYPQTLPDKNNMAKKAERSEKSLSSPRASSAFAKASASASKDKLVLRVKSNVGMKRPARQTKSAKKPKAKLKKNQKKLEAKKPKKPPTAFFYFLEDFRKQFQEENPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMIEFNKRMESGEYEEDEEDSEFTD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00109 221 Pfam HMG (high mobility group) box 133 201 IPR009071 -
Bach11g00109 221 MobiDBLite consensus disorder prediction 109 130 - -
Bach11g00109 221 MobiDBLite consensus disorder prediction 48 134 - -
Bach11g00109 221 SMART hmgende2 132 203 IPR009071 -
Bach11g00109 221 SUPERFAMILY HMG-box 119 203 IPR036910 -
Bach11g00109 221 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 133 202 IPR009071 -
Bach11g00109 221 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 103 218 IPR031061 -
Bach11g00109 221 CDD HMG-box_AtHMGB1-like 138 194 - -
Bach11g00109 221 Gene3D High mobility group box domain 126 217 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00109 Bach-Chr11 787666 790614 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bach11g00109 HMG_box 1.4e-17 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00109 - - vum:124844238 174.481