Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00106 ATGGGTCGTAGAAAAATTGAAATCAAATTGGTGGAGGATGTGGGTACTAGGCAGGTAACTTTCTCTAAGCGCAGGAGTGGGCTTTTTAAGAAAGCAACTGAATTGGCTATCTTGTGTGATGCTGAAATTGTTCTAATTGTATTCTCACCTGGCGGTAAGCCCTTCTCCTTTGGCACTCCAACTGTTGAAGCTGTCATTAATAGGTTTCTCCACCCAGAATCCAGTGCTGGCCGATATGCTTCTTCTTCTTCAATGGATCATCATCACAACAATGGGCTGAACCAGGAGCTGGAGGATGTGATGAAGAAATTGAAGGCTGCAAAGGAGGATGGTGTGATGCTTGACAAGTTCCTAAAGGAAAACAATTTGATCCATCGCAAGTTGTCCATTGATGGGCTTGACTCAGATGAGCTTCAGAAAATGAAAAATTCACTGAATCAGATCAAGGATGACGTTGAAGCATCCTCATCTTTGCTGCTCCTTGCGGAGAAACCAGTGAAATTTGAGGCAAATAATAATTAG 522 0.4272 MGRRKIEIKLVEDVGTRQVTFSKRRSGLFKKATELAILCDAEIVLIVFSPGGKPFSFGTPTVEAVINRFLHPESSAGRYASSSSMDHHHNNGLNQELEDVMKKLKAAKEDGVMLDKFLKENNLIHRKLSIDGLDSDELQKMKNSLNQIKDDVEASSSLLLLAEKPVKFEANNN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00106 173 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977|GO:0045944
Bach11g00106 173 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach11g00106 173 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach11g00106 173 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach11g00106 173 PANTHER MADS BOX PROTEIN 3 153 - -
Bach11g00106 173 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach11g00106 173 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach11g00106 173 SUPERFAMILY SRF-like 1 71 IPR036879 GO:0003677|GO:0046983
Bach11g00106 173 Coils Coil 90 110 - -
Bach11g00106 173 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 12 57 IPR002100 GO:0003677|GO:0046983
Bach11g00106 173 FunFam Agamous-like MADS-box protein AGL62 13 78 - -
Bach11g00106 173 Gene3D - 15 83 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00106 Bach-Chr11 779121 779642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00106 1 164 Type I MADS-box Gene Family AT2G34440 41.573 3.10e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bach11g00106 SRF-TF 4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00106 - - zju:107413672 156.762