Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00085 ATGGTAACGCTCTTGCTCTGCACCCTTCTTTACCTTTCTGAAAAGATTCCCGTTGGGGTGGTGCAAAAAAATACCCATGTGGTTTTAGCCGTCAACTTGTCAAGCCTTTTGTCCGAGGAGCCTATTTATTTAATTCAAGCGTTAGGGTTTGGATTTGCTGTATTTGTGTACCCTTTGCAGAAGGGTGATGCGATGAAGCAGTCTTTTGATAGTTCATCTTCAGGTCCTACCAAGATTCCATCTGTAAATATATCTAAGGAAGTGAGACGTGGTGCATGGGAGACTTTATCTGGTTCTGATGCATACCATGCGTCATCTGATGCTACCCTTTTTTCCAGCTCATTGCCTGTTTTGCCACATGAAAAGTTGAACTTGAATGAGACTGAAAATGGTTATCAATCTGTTGATGACATCACATCTAGCTTTCAAAAGCTCCATCAAGGCATCCAGGGTAATGATTCCCTTGAAGATCTTGATACCCATGCAATTGGACCCTTGCTTCCTGATGACGAGGAGGAGCTTTTAGCTGGCATAGCGGATGATTTTGACCTGAGTGGCTTACCTGGTTCCCTTGAGGACTTGGAAGAGTATGATCTTTTTGGTAGTGGTGGAGGTATGGAATTAGAAACTGATCCACAGGAAAGTCTCAGTGTGGGTATGTCAAAATTAAATTTCTCTGACAGTTCTATTGGCAATGGTATGGCCCATTATTCTTTTCCTAACGGTGTGGGAACTGTTGCTGGAGAACATCCATATGGGGAACATCCTTCTCGAACATTATTTGTTCGAAATATTAACAGTAATGTGGAGGATTCTGAACTGAGAGCCCTTTTTGAGCAATATGGTGATATTAGAACTCTCTATACTGCATGCAAACATCGTGGATTTGTAATGATATCCTATTATGATATCCGTGCTGCTCGAACAGCTATGCGTGCATTACAAAACAAACCACTGCGTCGCAGGAAACTTGACATTCATTTCTCAATACCAAAGGATAATCCATCAGACAAGGATATCAATCAGGGTACCTTGGTGGTGTTTAATTTGGATCCATCTGTTTCAAATGAAGACCTTCGCCAAATATTTGGTGCATATGGTGAGGTCAAAGAGATAAGGGAAACACCACATAAGAGGCATCATAAATTCATTGAATATTATGATGTTAGAGCTGCAGAAGCAGCACTTAAGTCATTGAACAGGAGTGACATAGCTGGTAAACGTATAAAGCTAGAACCAAGTCGTCCTGGTGGAGCTCGTCGAAATTTAATGCTGCAACTAAATCAAGAGCTTGAGCAAGATGAATCTTGGAGCTTCCGGCTGCAAGTGGGTTCACCACTTACCAACTCCCCGCCAGGTAACTGGCTGCAGCTTAACAGTCCTGTTGAACATAATCCAATACAAACTATGAGTAAATCCCCCGGATCTAGGATCATGAGCCCAACAACAGGAAACCATTTACCTGGCTTAGCTTCAATATTACAACCTCAGGTATCAAATACTGTCAAGGGTACAACCGTTGGCAAGGACTTAGGAAGGAGTATTCATGGAGAGCATTTATATGCTACCAGCAGTTCATCACATGGGGCTGCATTTCAGTCACATTCATTGCCAGAGCCAAAATTCACCCAATATCAGGGAGCATTGTCCTCTTTTGGTCCATCTACTTCCAATGGATCCTCAATTGAAACTTTGTCTGGCCCACAATTTTTATGGGGAAGTTCTACCCTATATTCAGAGCACACCAAACCTTCAGCTTGGACAAGGCCATCTGTAGGGCATCCATTTACATCAAATGGGAAGACCCATGCCTTCCCATACGCAAGTCAGAATAGTTCCTTCATTGGTTTATCTCAGCATCACCACCATCACCATGTTGGCTCTGCTCCATCTGGTGCTCCTTTTGAGAGGCATTTTGGTTTCCTTCCAGAGTCACCAGATGCCTCTTTCGTGAATCATGTCGCATATGGAGGCATGGGCATTGGACACAATGATGGAAATTACATTAGTAAAGTGGGTGGTTCTGTTAATACTGGCATTGCTATACCTAGAAATATGTCAGAAAATGGCTCTTCAAACTTCAGAATGAGATCTTCTCCAAGGCTTAGCCCAGTGTTTTTGGGTAATGGTCCTTACCCAGGACTGCCACCTACAGCATTTGAGGGTTTGACTGACCGTGGGCGGAGCAGAAGGATAGAAAACAATGCGAGCCAAGTTGATAGCAAGAAACAGTTTCAGCTTGACTTGGATAAGATTAAAAGTGGTGAAGATACAAGGACTACTTTAATGATAAAGAACATCCCAAATAAATACACTTCAAAAATGTTACTAGCTGCCATTGATGAATATCACAGGAGTACCTATGATTTTCTCTATCTGCCGATTGATTTTAAGAATAAATGCAACGTGGGCTATGCATTTATCAACATGCTCTCACCATCACTCATAATTCCATTCTATGAGTCATTTAGTGGGAAGAAATGGGAGAAGTTTAATAGTGAGAAAGTTGCTTCTTTGGCGTATGCTCGAATCCAAGGAAAGGCTGCCCTTGTTAGTCACTTCCAAAATTCGAGTTTAATGAATGAAGATAAGCGCTGTCGCCCTATTCTTTTCCATTCAGAGGGTTCTGAAGCTGGCGATCAGATCATACAAGAGCATCTTCCCTCCAACAATTTGAATATCCATGTCCTTAGGCCAAGTGAGTCACATTCAAGTGATTTTCCAGGAAGCCCTCCGAAGGATGGCCCTCCGGAGAACTTGGAGATAAGTTAA 2772 0.4242 MVTLLLCTLLYLSEKIPVGVVQKNTHVVLAVNLSSLLSEEPIYLIQALGFGFAVFVYPLQKGDAMKQSFDSSSSGPTKIPSVNISKEVRRGAWETLSGSDAYHASSDATLFSSSLPVLPHEKLNLNETENGYQSVDDITSSFQKLHQGIQGNDSLEDLDTHAIGPLLPDDEEELLAGIADDFDLSGLPGSLEDLEEYDLFGSGGGMELETDPQESLSVGMSKLNFSDSSIGNGMAHYSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESWSFRLQVGSPLTNSPPGNWLQLNSPVEHNPIQTMSKSPGSRIMSPTTGNHLPGLASILQPQVSNTVKGTTVGKDLGRSIHGEHLYATSSSSHGAAFQSHSLPEPKFTQYQGALSSFGPSTSNGSSIETLSGPQFLWGSSTLYSEHTKPSAWTRPSVGHPFTSNGKTHAFPYASQNSSFIGLSQHHHHHHVGSAPSGAPFERHFGFLPESPDASFVNHVAYGGMGIGHNDGNYISKVGGSVNTGIAIPRNMSENGSSNFRMRSSPRLSPVFLGNGPYPGLPPTAFEGLTDRGRSRRIENNASQVDSKKQFQLDLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDEYHRSTYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYESFSGKKWEKFNSEKVASLAYARIQGKAALVSHFQNSSLMNEDKRCRPILFHSEGSEAGDQIIQEHLPSNNLNIHVLRPSESHSSDFPGSPPKDGPPENLEIS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00085 923 MobiDBLite consensus disorder prediction 899 923 - -
Bach11g00085 923 Gene3D - 342 439 IPR012677 -
Bach11g00085 923 CDD RRM2_MEI2_like 342 412 - -
Bach11g00085 923 FunFam Protein MEI2-like 1 342 437 - -
Bach11g00085 923 PANTHER RNA RECOGNITION MOTIF-CONTAINING 75 877 - -
Bach11g00085 923 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 343 416 IPR000504 GO:0003723
Bach11g00085 923 SUPERFAMILY RNA-binding domain, RBD 761 846 IPR035979 GO:0003676
Bach11g00085 923 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 258 331 IPR000504 GO:0003723
Bach11g00085 923 Pfam RNA recognition motif 2 759 855 IPR007201 -
Bach11g00085 923 FunFam MEI2-like protein 5 isoform 2 247 341 - -
Bach11g00085 923 CDD RRM3_MEI2_like 762 847 IPR034454 -
Bach11g00085 923 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 345 410 IPR000504 GO:0003723
Bach11g00085 923 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 260 324 IPR000504 GO:0003723
Bach11g00085 923 SUPERFAMILY RNA-binding domain, RBD 255 418 IPR035979 GO:0003676
Bach11g00085 923 Gene3D - 247 341 IPR012677 -
Bach11g00085 923 CDD RRM1_MEI2_like 257 333 IPR034453 -
Bach11g00085 923 SMART rrm1_1 259 327 IPR000504 GO:0003723
Bach11g00085 923 SMART rrm1_1 344 412 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00085 Bach-Chr11 598436 604182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00085 253 451 Eukaryotic Initiation Factors Gene Family AT1G71770 26.222 8.02e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00085 - - gmx:100800877 1454.88