Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00058 TCGGCGATGGCTGAGAATTCATCAAGTAACGGAACCCATGAGGTTGCCGTGAACATAAACGGTGATGTCAATCGCTGTGCCTCCAGAAACGAAGACTCAGGGATCTACCTAACTGTCCCTTTCTTACAGAAGTTGGTAGCAGAGGTGGTGGGCACATACTTCTTGATATTTGCAGGTTGTGGCTCAGTCGTCGTGAATAAGGGATATGCTAATGTGGTGACACATCCAGGGATTGCAATAGTTTGGGGTGTGGTTGTGATGGTGCTTGTTTACTCTGTTGGTCATATCTCTGGTGCCCATTTTAACCCTGCTGTCACCCTTGCTTTTGCTTCCACCAGGAGGTTCCCATTGAAACAGGTCCCAGCTTATATTGCAGCTCAGGTTCTGGGATCTATACTAGCCAGTGGAACTCTCAGATTGCTATTTACAGGCAGCCATGACTACTTTACAGGAACTCTCCCAACTGGGTCTAATTTGCAATCTTTTGTGATTGAATTCATCATCACTTTCTACCTCATGTTTGTAATTTCTGGCGTTGCCACTGATAACAGAGCTATTGGTGAGCTAGCTGGTCTTGCAGTAGGGTCTACGGTGCTATTGAATGTGATGTTTGCCGGGCCAATCTCAGGAGCATCAATGAACCCAGCAAGAAGCTTAGGCCCTGCCATCGTATCACATGAGTATAGAGGAATATGGATATACATGGTGTCACCAATTCTAGGTGCTGTGGCCGGCGCGTGGGTTTATAACGTCATTAGATACACCGACAAGCCATTGCGTGAGATCACAAAGAGCGCATCCTTCCTCAAAGGAGCCGGCCGGAGTGCCAACTAG 834 0.4748 MAENSSSNGTHEVAVNINGDVNRCASRNEDSGIYLTVPFLQKLVAEVVGTYFLIFAGCGSVVVNKGYANVVTHPGIAIVWGVVVMVLVYSVGHISGAHFNPAVTLAFASTRRFPLKQVPAYIAAQVLGSILASGTLRLLFTGSHDYFTGTLPTGSNLQSFVIEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPISGASMNPARSLGPAIVSHEYRGIWIYMVSPILGAVAGAWVYNVIRYTDKPLREITKSASFLKGAGRSAN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00058 275 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach11g00058 275 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach11g00058 275 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach11g00058 275 PRINTS Major intrinsic protein family signature 230 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach11g00058 275 PRINTS Major intrinsic protein family signature 162 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach11g00058 275 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach11g00058 275 Gene3D Glycerol uptake facilitator protein. 10 262 IPR023271 -
Bach11g00058 275 CDD MIP 41 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach11g00058 275 Pfam Major intrinsic protein 36 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach11g00058 275 SUPERFAMILY Aquaporin-like 35 261 IPR023271 -
Bach11g00058 275 PANTHER AQUAPORIN NIP2-1 33 267 IPR034294 -
Bach11g00058 275 FunFam Aquaporin NIP1-1 6 260 - -
Bach11g00058 275 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Bach11g00058 275 NCBIfam MIP family channel protein 45 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00058 Bach-Chr11 426547 428550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00058 41 275 Major Intrinsic Protein MIP AT5G37820 64.681 3.41e-108 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00058 K09874 - gmx:100794883 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00058 11 426547 428550 Bach11g00058 11 426547 428550 ECH