Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00053 AGATGCCCTTCCCTTAGATTAGATAGCCCCTTATCTGACAACCAAATTCTTACCAAAGACAATGGTAATTTCCCTCCAAAGGCCTTATCTACCCTTCGTGGTTTTTGAGGTCGTACAATAAATTTACCATCTTTCCCTTGCTTTCTTTATTCATTCTCTCCTCTCTATTTGCATGCTGTAGAGCAAAGTAATAGAGAAAAGAAAAGAAAAAAGAAAACGAATGGACAAGAATCTGCATACTCTTCAGTCTAAGTTCGGGCAGTCATTTTCACGAAGGCTGGAAATAAAAATAAAAAAACAAAAACAAAGTCTTCGGAAATTCAGTCTTTCTTTCTTGCACGCGGATTCAGCCGAATTAATAAATCCCCTATCTCTCTTTCTTGGGGATTTTCAAGCTCCGTTCTTTCTTAACCCTTTGAAGATTCAAACTTGCATCACCAAACAAACTGTTTCAGTCTTCGGCTGTTAGCTTATATAGCCTTGCCGTTTTGGAAGCCAGAAAGTTTTTCCCAGAAAAAAAGAGAATTTATTGATCTGATTATTGGGACAAAGTTCGCAAATTGATTGTCTCCCTTTGTGAATTTTTCTCGATTGTTGAATTTGCCTCCTGGATATTGCGGATTGTCACTGAAAAGTGGAGGTTCCAGCTCATTGGATTTACCCCCTTCACGAATTCGTGGTCTGTGATTTCTTAAGCCAAGAAAGTCTCTCCCAATTTTCTATGGCTTCAGGGGCTATATTCTCCTCGCTGCGGTGGCGAAGGTCGCCGTCGTTGGAGGCGTTTCTTGTTCCGGTAGACCTCACAGACGTTGCCTTGGTACAAACCCTGGTCTCTGTCGCCACTGAGCTCGTCTCCTTCTTCTCTGGGAGGCCCTTCTTCTTCCAGCGCAAGAATTCGAGGTCGCTTATCAGGAAAGTAGAGATTTTTCAGTTGCTTTTTCAGCATTTGAGCAATTCGGGTACGGCTCTTCCCCCTACTGCGTTGCTTTGTCTTAAAGAGCTTTATTTGCTGCTGTACCGGTCCAAGATTCTTCTTGATTATTGCGCACGATCTAGTAAGTTGTGGCTTCTGCTCCAAAACCATTCGATTTCGGGTCATTTCCATGATTTGAACCAAGAAATTTCGACCCTTTTCGATGTTTTTCCCATAAAGGATGCTGAATTGAGTGAGGATGTTAGGGAGCAGGTTGAGCTATTGCAGAAACAATCAAGGAGGGCTCAGTTGTATATTGACCAAAAAGATGATGAACTCAGGAGCCGCTTTTTGTCGTTTCATGATGAGTTTGAGAATGGGCGGATTCCTGATTCTGATGAATTGAGATCATTTTTTGTGGATAAATTGCAGATTGTGGATGCCAGGAGTTGTAGAAATGAGATTGAGTCCTTGGAGGAGCAGATTATAAATCATGAGGGAGATGTTGAGCCAACAATTTCTGTGCTTAATGGGTTGGTTGCGATGACGCGGTATTGTAGATTTTTGCTTTTTGGATTTCAGGGGGAAGACATGGATATGGGAAATGGAAATCAAAAAAGGCCTAAGAGGAGATTGATTGCACAAGAAATTGCTGAAACATTCTTAACTATTCCAAAGGACTTTTGTTGTCCAATATCATTGGAATTGATGTCAGACCCAGTGATAATCTCCACAGGACAAACTTACGAAAGAAGTTCCATAACCAGGTGGATGGAAGAAGGACATTGTACTTGTCCGAAAACAGGGCAGATGCTTGCCCACACCCGGCTTGTACCTAACCGGGCTTTAAGGAATTTGATCGTGCAGTGGTGCACTGCACATGGAATCCCCCGTGAAACACCAGAGGTCATCGATGCTTCTGCTGAAAGTTTTGCTTCAGCTTCTCCCACCAAAGCTGCCCTTGAAGCCAACAGAGCAACGGCAAAACTTCTCATTCAGCAGCTGGCAAATGGGTCACAAGCTGCAAAGACTGTAGCTGCTCAGGAGATACGTTTGCTAGCAAAAACAGGCAAAGAAAACCGCGCCTTCATCGCAGAAGCTGGGGCAATCCCCTATCTTCAGAATTTACTTTCATCTCCTAACGCCATTGCTCAGGAGAATTCTGTAACTGCATTGCTCAATCTATCAATTTATGACAAAAATAAAAGTCGGATCATGGATGAGGAAGGGTGTCTGGGTTCAATAGTTGACGTGTTGAGACTTGGGCACACAACAGAAGCAAGGGAAAATGCCGCAGCGACATTGTTTAGCTTATCTGCTGTCCATGACTATAAGAAGAGGATTGCAGATAAGGTTGGAGCCGTTGAAGCTCTTGCAATGCTGTTGCGTATGGGAACACCACGAGGAAAGAAGGATGCAGTAACAGCTTTATTTAATCTATCAACGCACACTGAGAATTGTGTTAGAATGATAGAAGCAGGGGCTGTAACAGCACTTGTTGGGGCTTTGGAAAATGAGGGAGTTGCTGAGGAAGCAGCAGGTGCCCTGGCCTTGATTGTTCGGCAGCCGATTGGGGCCAAAGCAGTGGTGAAGGAGGAAGCAGCAGTGGCTGGATTGTTAGGAATGATGCGTTGTGGGACACCAAGGGGGAAGGAGAATGCTGTTGCAGCGTTGTTGGAGATGTGCCGGAGTGGTGGCGCTGCTGCGACTGAAAGGGTGGTCAAGGCTCCAGCTTTAGCAGGTTTACTTCAAACACTGCTGTTTACGGGGACAAAGCGTGCAAGACGTAAAGCAGCTTTACTTGCCAAAGTATTTCAGAAATGTGAAAATACGTCTTTGCATTATGGTGGATTAGGTGTAGGGTACGCATTTGCCAGCAATTCAGCTGCAAATAGAGATACTAGCTTTGCTGGTGATGTTTCAGTACCAATGTCCATTTCTGTCCCCCTTTTGTAGATGGCTTCAGGGGCTATATTCTCCTCGCTGCGGTGGCGAAGGTCGCCGTCGTTGGAGGCGTTTCTTGTTCCGGTAGACCTCACAGACGTTGCCTTGGTACAAACCCTGGTCTCTGTCGCCACTGAGCTCGTCTCCTTCTTCTCTGGGAGGCCCTTCTTCTTCCAGCGCAAGAATTCGAGGTCGCTTATCAGGAAAGTAGAGATTTTTCAGTTGCTTTTTCAGCATTTGAGCAATTCGGGTACGGCTCTTCCCCCTACTGCGTTGCTTTGTCTTAAAGAGCTTTATTTGCTGCTGTACCGGTCCAAGATTCTTCTTGATTATTGCGCACGATCTAGTAAGTTGTGGCTTCTGCTCCAAAACCATTCGATTTCGGGTCATTTCCATGATTTGAACCAAGAAATTTCGACCCTTTTCGATGTTTTTCCCATAAAGGATGCTGAATTGAGTGAGGATGTTAGGGAGCAGGTTGAGCTATTGCAGAAACAATCAAGGAGGGCTCAGTTGTATATTGACCAAAAAGATGATGAACTCAGGAGCCGCTTTTTGTCGTTTCATGATGAGTTTGAGAATGGGCGGATTCCTGATTCTGATGAATTGAGATCATTTTTTGTGGATAAATTGCAGATTGTGGATGCCAGGAGTTGTAGAAATGAGATTGAGTCCTTGGAGGAGCAGATTATAAATCATGAGGGAGATGTTGAGCCAACAATTTCTGTGCTTAATGGGTTGGTTGCGATGACGCGGTATTGTAGATTTTTGCTTTTTGGATTTCAGGGGGAAGACATGGATATGGGAAATGGAAATCAAAAAAGGCCTAAGAGGAGATTGATTGCACAAGAAATTGCTGAAACATTCTTAACTATTCCAAAGGACTTTTGTTGTCCAATATCATTGGAATTGATGTCAGACCCAGTGATAATCTCCACAGGACAAACTTACGAAAGAAGTTCCATAACCAGGTGGATGGAAGAAGGACATTGTACTTGTCCGAAAACAGGGCAGATGCTTGCCCACACCCGGCTTGTACCTAACCGGGCTTTAAGGAATTTGATCGTGCAGTGGTGCACTGCACATGGAATCCCCCGTGAAACACCAGAGGTCATCGATGCTTCTGCTGAAAGTTTTGCTTCAGCTTCTCCCACCAAAGCTGCCCTTGAAGCCAACAGAGCAACGGCAAAACTTCTCATTCAGCAGCTGGCAAATGGGTCACAAGCTGCAAAGACTGTAGCTGCTCAGGAGATACGTTTGCTAGCAAAAACAGGCAAAGAAAACCGCGCCTTCATCGCAGAAGCTGGGGCAATCCCCTATCTTCAGAATTTACTTTCATCTCCTAACGCCATTGCTCAGGAGAATTCTGTAACTGCATTGCTCAATCTATCAATTTATGACAAAAATAAAAGTCGGATCATGGATGAGGAAGGGTGTCTGGGTTCAATAGTTGACGTGTTGAGACTTGGGCACACAACAGAAGCAAGGGAAAATGCCGCAGCGACATTGTTTAGCTTATCTGCTGTCCATGACTATAAGAAGAGGATTGCAGATAAGGTTGGAGCCGTTGAAGCTCTTGCAATGCTGTTGCGTATGGGAACACCACGAGGAAAGAAGGATGCAGTAACAGCTTTATTTAATCTATCAACGCACACTGAGAATTGTGTTAGAATGATAGAAGCAGGGGCTGTAACAGCACTTGTTGGGGCTTTGGAAAATGAGGGAGTTGCTGAGGAAGCAGCAGGTGCCCTGGCCTTGATTGTTCGGCAGCCGATTGGGGCCAAAGCAGTGGTGAAGGAGGAAGCAGCAGTGGCTGGATTGTTAGGAATGATGCGTTGTGGGACACCAAGGGGGAAGGAGAATGCTGTTGCAGCGTTGTTGGAGATGTGCCGGAGTGGTGGCGCTGCTGCGACTGAAAGGGTGGTCAAGGCTCCAGCTTTAGCAGGTTTACTTCAAACACTGCTGTTTACGGGGACAAAGCGTGCAAGACGTAAAGCAGCTTTACTTGCCAAAGTATTTCAGAAATGTGAAAATACGTCTTTGCATTATGGTGGATTAGGTGTAGGGTACGCATTTGCCAGCAATTCAGCTGCAAATAGAGATACTAGCTTTGCTGGTGATGTTTCAGTACCAATGTCCATTTCTGTCCCCCTTTTGTAGTGATACTACCCTTGTGTTTATCACGTTTATATACCTTCAATTTTTATTGGAAGTCTTTACAGATTCTTTCATTGAGATTAAAAATCATAAGGAATTTTGTAGGAATACCTCATGTATTCTGAGAGAAAACGCGAGTATTGAGCAGTTTACTTCAATACATGTTGTAATAATCATAAATATAGGAAGCAAGAAT 5210 0.4438 MASGAIFSSLRWRRSPSLEAFLVPVDLTDVALVQTLVSVATELVSFFSGRPFFFQRKNSRSLIRKVEIFQLLFQHLSNSGTALPPTALLCLKELYLLLYRSKILLDYCARSSKLWLLLQNHSISGHFHDLNQEISTLFDVFPIKDAELSEDVREQVELLQKQSRRAQLYIDQKDDELRSRFLSFHDEFENGRIPDSDELRSFFVDKLQIVDARSCRNEIESLEEQIINHEGDVEPTISVLNGLVAMTRYCRFLLFGFQGEDMDMGNGNQKRPKRRLIAQEIAETFLTIPKDFCCPISLELMSDPVIISTGQTYERSSITRWMEEGHCTCPKTGQMLAHTRLVPNRALRNLIVQWCTAHGIPRETPEVIDASAESFASASPTKAALEANRATAKLLIQQLANGSQAAKTVAAQEIRLLAKTGKENRAFIAEAGAIPYLQNLLSSPNAIAQENSVTALLNLSIYDKNKSRIMDEEGCLGSIVDVLRLGHTTEARENAAATLFSLSAVHDYKKRIADKVGAVEALAMLLRMGTPRGKKDAVTALFNLSTHTENCVRMIEAGAVTALVGALENEGVAEEAAGALALIVRQPIGAKAVVKEEAAVAGLLGMMRCGTPRGKENAVAALLEMCRSGGAAATERVVKAPALAGLLQTLLFTGTKRARRKAALLAKVFQKCENTSLHYGGLGVGYAFASNSAANRDTSFAGDVSVPMSISVPLL 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00053 715 Gene3D - 370 510 IPR011989 -
Bach11g00053 715 FunFam RING-type E3 ubiquitin transferase 364 685 - -
Bach11g00053 715 Pfam U-box domain 288 358 IPR003613 GO:0004842|GO:0016567
Bach11g00053 715 FunFam RING-type E3 ubiquitin transferase 287 362 - -
Bach11g00053 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 432 474 IPR000225 GO:0005515
Bach11g00053 715 ProSiteProfiles U-box domain profile. 287 361 IPR003613 GO:0004842|GO:0016567
Bach11g00053 715 SMART arm_5 547 585 IPR000225 GO:0005515
Bach11g00053 715 SMART arm_5 506 546 IPR000225 GO:0005515
Bach11g00053 715 SMART arm_5 421 461 IPR000225 GO:0005515
Bach11g00053 715 Pfam Armadillo/beta-catenin-like repeat 422 460 IPR000225 GO:0005515
Bach11g00053 715 SUPERFAMILY RING/U-box 277 362 - -
Bach11g00053 715 SUPERFAMILY ARM repeat 392 666 IPR016024 -
Bach11g00053 715 SMART Ubox_2 291 354 IPR003613 GO:0004842|GO:0016567
Bach11g00053 715 PANTHER U BOX DOMAIN-CONTAINING 60 672 - -
Bach11g00053 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 517 559 IPR000225 GO:0005515
Bach11g00053 715 Gene3D - 511 667 IPR011989 -
Bach11g00053 715 Coils Coil 212 232 - -
Bach11g00053 715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 361 IPR013083 -
Bach11g00053 715 CDD RING-Ubox_PUB 289 341 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00053 Bach-Chr11 398648 401709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00053 1 715 U-box Gene Family AT1G29340 69.755 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00053 - - gmx:100811153 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00053 11 398648 401709 Bach11g00053 11 398648 401709 ECH