Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00052 ATGACAAGGGCTGTTCGCAATAGGATACTCAAGGATGCCAATGGTGATATTAGTGATCATCTACGCAACCACATCCATTTAACTAATTGTATTCACTTGAAGAACCATATGCACAAGAACAGCCCAATACTGGCTAATAGGTCACTTATGAGGGACCTTGTCGTGCTGCAGAGGTCACGGTCTCTCAGGGACCCTTCTGCAAGTCCTCCATCTTGGCATTCACCTTCTATAGTTGATGCGCTTTCCAAGAGAGTTGAAAATGATACGATGATTCAGGAGGGAAGAAGGTCAGTGGGCATTGAAGGCCGGAAGGTAGGTAGGAGACTATCAGGAACCTCACCACCCTTGGTTACTTTAGGTACATCAAAAGTTGCTCCAGGTGAGGTGACTAGGGGGAATGGTGGGGTAGTAGCAAGTAGTGAATATAGTAGCTTGAGTGGAATAGGGAATGGGAGAAAAGTTGGGAGAGAAGAATCTGGTAGGAAGAGTGATAAACCTGTTCTTTTGGGTGTCAATGAAGAGAAACCTCTCAGTAATGATGGTAAAGATTTGTTCCATGATGTTGTTTCAAGGCACTCCGAATCTAAAAATAGAAAGATTAAACAAATTGGGAAACATGTTCGTGATGTTCAAGTTAAGACCCTTTCTGAGCAGCTGAATAATGTCTCTTTGGATAGTGATGATTTAGCATCTTCCAACATTCATGGTCATGGAAGGTATCTTCAACATAAGAAAACAATCAACCCTGAAGCCAGCATACATGGTCATTGCAATGGATCGAATAAGGTGAAAAGACGTAAGTTCCAAAGTGCGAGAAGAACTCGCGCTACTACTGCATCCAGAGATACTAGTGGAGCTCAGAATGAATTGTCGGTGGCTTCCAACTCATTAGCTCAAGGTTCAGCCCACCATAAATATCACATCAATGAGGCAGATGAGTATGCTGATGAAAATGTCACTAGAGCTCCCAAAAATGGGTGCAGTATTCCTTGGAATTGGTCAAGAATTCATCACAGAGGTAAAACATTTCTTGACATGGCTGGAAGAAGTTTCTCATGTGGTTTATCTGACTCAAGGCTAAAGAAGGGGACCTTGGCTGCCAATGGAAGAAATATTTCTGAAATGCCTGTGGTGTCTGACCACTCAAGCTCGTCTACGAAGTCTGATGCAGAGGCACTACCTTTACTAGTTGAGGCATCTGGAAGCAGTGAAAATGCTTGTTGGGGACGTGACTATTTTGGGGAACTTGGTATTTTTGCTGATAACTTGTTCAAGAATGATGCTGATTCTGACCTCGCTTCTGAAGCTAGATCTGGTGATCAGCACAAGTTGAGAGGGAATCACCGTAGCAGGCATCAAAGCTTAACACAAAAATACATGCCACGAACCTTTAGAGATATGGTGGGACAGAATTTGGTGGCACAAGCTCTTTCAAACGCAGTCATGAGAAGGAAAGTTGGCTTGTTATATGTGTTTTATGGACCTCATGGCACTGGAAAAACTTCCTGTGCTCGCATATTTGCCAGAGCTTTGAATTGCCAATCTTTAGAACATCCAAAACCTTGCGGCTTTTGCAATTCTTGCATGGCACATGATATAGGAAAGAGTAGAAGTATAAGGGAAGTTGGTCCTGTCAGTAATTTTGACTTTGACAGCATCATGGATCTACTTGACAATATGATTGTTTCCAAACTTCCATCACAGTACAGAGTATTTATTTTCGATGATTGTGATACTCTATCAGCTGATTGCTGGAGTGCTATATCAAAGGTCATTGATCGAGCACCTAGACATCTGGTTTTTATCCTTGTCTGTTCGAGTCTTGATGTATTGCCTCATATAATAATATCCAGGTGTCAGAAATTCTTTTTCCCAAAGCTGAAGGATGCAGATATTATTTATACATTGCAGTGGATTGCAACCAAAGAAGGTCTAGAAATAGATAAGGATGCCCTGAAACTCATTGCGTCAAGATCAGATGGTTCGTTGAGAGATGCTGAGATGACTCTTGAACAACTGAGCTTGCTTGGTCAGAGAATATCTGTTCCGCTTGTTCAGGAATTGGTGGGGCTTATCTCTGACGAGAAATTGGTTTATCTGCTTGATTTGGCATTATCTGCAGACACAGTTAATACTGTGAAGAATTTGAGAGTAATCATGGAAACTGGTGTAGAGCCATTGGCTTTAATGTCACAGCTTGCTACAGTAATTACTGATATACTTGCTGGCACTTATGATTTCACAAAAGATATGCGAAGAAGGAAGTTTTTTCGGAGACATCCATTATCCAAAGGGGACATGGAAAAGCTACGCCAGGCTCTGAAAACTTTATCTGAAGCTGAGAAGCAGTTGAGAATGTCTAATGACAAACTAACTTGGCTAACAGCTGCGTTGCTTCAGCTTGCTCCAGACCAGCAATATATGTTGCCTACTTCTTCTGATGTTAGTTTCAAACATAGTCCATTAGCATTAAACAACGTAGATTTGAGAGAAGCAGCCAGAAGAACTAGCAAACATGTTGAAATTCCTAATAAAGAGAGACATTTATCAATGGATGCTGGAAGTTCTGCAGATGGTATGGCAAACAGTGTTTGTTCAGAGAGAAAAAAGCATGCTGAGGCTAGTGTTGCTCCTCAACTGACATCTTCACACGTTACCAAGATGACTAGGATGAATAACAAGCAATTTTTTGTTAAAGGTCGTAAAGGAATTGAAGAAATATGGTTTGAGGTGCTTGAGAGGATTCAAGCTACTGGTCTGAAAGAGTTTTTATGTCAAGAAGGAAAGCTGATCTCAATTAGTTTTGGTGCAGCCCCAACTGTGCAGCTTATGTTTAGTTCCCAACTGACCAAGTCCACTGCTGAGAAGTTCAGCGGCCACATCTTACAAGCATTTGAGTCCATCCTTGGATCTTCTGTGACAATAGAAATTAGATGTGAGTCAAATAAAGATGCAGGATCAGGATCTCAACTGCCCCTTGTCATGCCTGCTACTAAAGATAGTTCGTCTAAGATTAAAGACTTAAATGGAACTGGTGCTGAAGCTCAGACATCACAACCTGATCTTGTTGAAAAGAGAAGGGACGAAATTGTAGAAGAAGCAGAGTTTCCCAGGCAGTGCAATCCTAATGAGCAACAGGTTGATATGCATACAACATCTAGTGCCCACAAGAAGCCAACTGTGGCTTCAAACTCAGATATAAGAAATCTCAGAGGACAAAGTAAGAGTCAGAGTATTGTGAGAAGTAAGGTATCCCTTGCTCATGTAATCCAGCAGGCTGAAGGATGTACTCAGCCAAGTGGGTGGTCAAAACGCAAAGCAGTTTCTATTGCTGAAAGGCTTGAACAAGAGAATATGAGACTGGAGCCAAGGTCAAGAAGCTTACTATGCTGGAAAGCATCAAGAGTAACCCGTCGTAAGCTTTCACGATTGAAAACTCGGGCCCGAAAGCCGCATGCATTGCTGAACCTCGTCTCATGTGGGAAATGTCTCTCTAGAAAATCTACGAGGTAGTTTTGGGAAGATTTCCAAGGTTCATTCAGTTGCCTGTATTTAGGCTATTGTCCCCATGTGTAATAGGCCAATTCTTACAATTCAAGCTTTTTTTATTTTTATTTTTATTTTTAAAAAAT 3632 0.4149 MTRAVRNRILKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILANRSLMRDLVVLQRSRSLRDPSASPPSWHSPSIVDALSKRVENDTMIQEGRRSVGIEGRKVGRRLSGTSPPLVTLGTSKVAPGEVTRGNGGVVASSEYSSLSGIGNGRKVGREESGRKSDKPVLLGVNEEKPLSNDGKDLFHDVVSRHSESKNRKIKQIGKHVRDVQVKTLSEQLNNVSLDSDDLASSNIHGHGRYLQHKKTINPEASIHGHCNGSNKVKRRKFQSARRTRATTASRDTSGAQNELSVASNSLAQGSAHHKYHINEADEYADENVTRAPKNGCSIPWNWSRIHHRGKTFLDMAGRSFSCGLSDSRLKKGTLAANGRNISEMPVVSDHSSSSTKSDAEALPLLVEASGSSENACWGRDYFGELGIFADNLFKNDADSDLASEARSGDQHKLRGNHRSRHQSLTQKYMPRTFRDMVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEHPKPCGFCNSCMAHDIGKSRSIREVGPVSNFDFDSIMDLLDNMIVSKLPSQYRVFIFDDCDTLSADCWSAISKVIDRAPRHLVFILVCSSLDVLPHIIISRCQKFFFPKLKDADIIYTLQWIATKEGLEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVYLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGTYDFTKDMRRRKFFRRHPLSKGDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYMLPTSSDVSFKHSPLALNNVDLREAARRTSKHVEIPNKERHLSMDAGSSADGMANSVCSERKKHAEASVAPQLTSSHVTKMTRMNNKQFFVKGRKGIEEIWFEVLERIQATGLKEFLCQEGKLISISFGAAPTVQLMFSSQLTKSTAEKFSGHILQAFESILGSSVTIEIRCESNKDAGSGSQLPLVMPATKDSSSKIKDLNGTGAEAQTSQPDLVEKRRDEIVEEAEFPRQCNPNEQQVDMHTTSSAHKKPTVASNSDIRNLRGQSKSQSIVRSKVSLAHVIQQAEGCTQPSGWSKRKAVSIAERLEQENMRLEPRSRSLLCWKASRVTRRKLSRLKTRARKPHALLNLVSCGKCLSRKSTR 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00052 1170 CDD HLD_clamp_pol_III_gamma_tau 627 690 IPR045085 -
Bach11g00052 1170 MobiDBLite consensus disorder prediction 146 165 - -
Bach11g00052 1170 FunFam DNA polymerase III subunit gamma/tau 628 690 - -
Bach11g00052 1170 NCBIfam DNA polymerase III subunit gamma/tau 453 801 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Bach11g00052 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 674 IPR027417 -
Bach11g00052 1170 FunFam DNA polymerase III subunit gamma/tau 449 626 - -
Bach11g00052 1170 Pfam DNA polymerase III, delta subunit 470 627 - -
Bach11g00052 1170 MobiDBLite consensus disorder prediction 273 289 - -
Bach11g00052 1170 MobiDBLite consensus disorder prediction 1000 1018 - -
Bach11g00052 1170 MobiDBLite consensus disorder prediction 434 454 - -
Bach11g00052 1170 Gene3D - 628 690 - -
Bach11g00052 1170 MobiDBLite consensus disorder prediction 1000 1021 - -
Bach11g00052 1170 MobiDBLite consensus disorder prediction 1041 1077 - -
Bach11g00052 1170 MobiDBLite consensus disorder prediction 251 289 - -
Bach11g00052 1170 Gene3D - 445 624 IPR027417 -
Bach11g00052 1170 SUPERFAMILY post-AAA+ oligomerization domain-like 699 801 IPR008921 GO:0003677|GO:0006260
Bach11g00052 1170 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 456 848 - -
Bach11g00052 1170 MobiDBLite consensus disorder prediction 106 136 - -
Bach11g00052 1170 Coils Coil 767 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00052 Bach-Chr11 389081 394648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00052 453 756 Core DNA Replication Machinery Family AT1G21690 24.430 6.62e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00052 - - gmx:100793832 1751.1