Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00042 ATGGGAGCAACAACTGATGGAAGCCGTGGCCGGAGAAAGTTATCATCCAGAGGCCACCCTAAGTTTGTCGGAGTCCGGCAACGCCCCTCGGGAAGATGGGTTGCGGAGATTAAGGACTCTCTTCAGAAGGTTAGGCTCTGGCTTGGAACATTTGACACTGCAGAGGATGCAGCTCGTGCCTATGACACTGCTGCTCGAGCTCTGCGCGGCCCCACTGCTCGTACCAACTTCGATTTGCCGGAGCATCCAGCCACCGGCGCTGGGGGTAAGTGTGGTGGTCGCTCACACTACATGCCAGATAGTATTGAGCCTTTTTCATTTGAGGATGTGTGTGAGCCAGGAGCTGATGTTGATGGCCTTCTTGGTGCACTTAAGGACAAACAGTTTGATGACAGAGGAGTCAAGTTTCCCTCACCTCTTTCTCTTTCTCTTTCATCTCGTAATGTTTCAAGTTCAACTAGCAACCATTCAGGGAATAATAAGAAAGATTTATCATCAGCTGCTGCTTTTGCTCACATGGCTGGAACCACAAACCCTACGCTGGATTTTACAAGCATTTCATCAAAGACTTCTGCTAAGAGTGTGCTTATCTCGACGGATAATCATGATTGTGGAGGTGCCATTGCAGGAAATGCTGTTGTGAATTCTCATCAACCTAGCCATGTCATGCCCACACCAAGCATGATTAACTGGTCCAATGAAATGGGTCATGAGTTGTCTTGGCCTCCACAGACGAGCCCGGTTACTCAAAATAGCTTGTTTTCCTCTTTAAGTGCAGCAACATATATATGGCCTTTCTCTGGGCTAACTGAATCTACTAGTAATATTGGTATGGCATATTCAGATCAATTTCCATCAACTAGGACTATGGTAAGCATGCAATTGCCACAAAGTGGTGCCGTACCTGAAGGGTTTTGGGTACCTGATCAGCAACAACAGTTTGTGCACTGTGAGAATAATAGTTGGTTGTCTGCTTCAAATGGTACTTGGGATCCCTTGCTCTATGTTAATTCAATTTAA 1020 0.4657 MGATTDGSRGRRKLSSRGHPKFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDTAARALRGPTARTNFDLPEHPATGAGGKCGGRSHYMPDSIEPFSFEDVCEPGADVDGLLGALKDKQFDDRGVKFPSPLSLSLSSRNVSSSTSNHSGNNKKDLSSAAAFAHMAGTTNPTLDFTSISSKTSAKSVLISTDNHDCGGAIAGNAVVNSHQPSHVMPTPSMINWSNEMGHELSWPPQTSPVTQNSLFSSLSAATYIWPFSGLTESTSNIGMAYSDQFPSTRTMVSMQLPQSGAVPEGFWVPDQQQQFVHCENNSWLSASNGTWDPLLYVNSI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00042 339 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Bach11g00042 339 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Bach11g00042 339 Gene3D AP2/ERF domain 21 79 IPR036955 GO:0003700|GO:0006355
Bach11g00042 339 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 17 209 - -
Bach11g00042 339 MobiDBLite consensus disorder prediction 1 27 - -
Bach11g00042 339 MobiDBLite consensus disorder prediction 73 92 - -
Bach11g00042 339 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Bach11g00042 339 SUPERFAMILY DNA-binding domain 21 78 IPR016177 GO:0003677
Bach11g00042 339 FunFam ethylene-responsive transcription factor RAP2-11 20 79 - -
Bach11g00042 339 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Bach11g00042 339 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Bach11g00042 339 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00042 Bach-Chr11 303389 304408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00042 9 77 AP2-EREBP Transcription Factor Family AT5G19790 67.143 1.82e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach11g00042 AP2 1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00042 - - gmx:102661478 273.478