Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00038 ATGGATCAGGCTAGATGGCAAAGAAGTGATGAGGTATTAGATCTTGTTGATGAAGGGATAGATAATAAATTGAGCCATTCTGCTGAAGGGCTTGCTGTAACTGGGGACAGCTTGAGTGAGAGAGCTAGTGTAAATGGAGAAGATGGGACTTCAAAGGAGATGGATAAGGATCTGGGGTCAAATAAGGAACTGAAGGAGGGATCTGAGGAACTTACAAATCAGGACATGCATGATCAGCAGAATAACAGTGAGACATTTGATGGAGTTGATCAAGGAACTAGTTTTACTTCTGGAAATTTGGTTAATGGAGGAGGACTTGAGACTGTGGTTGTAATAGATTCTTCTGGGGCAGATAATGTGGGCGGAGATTATAGGAAATTGGAAGGAAAGGTTAATGAATCAGGGTTAAACATGGTGTCTGCGAGAGCACCAAAAGGGGTTTCTGAAAGAGATAAAAGTTCGTGTGTGATTGATATAAAGGGCAGCAGCTACAAAGGTTTCAGTGAGAATTTGGATGGTGAAAGAACTTGTAGGATTTGTCATCTGGCTTCTGGGCAACCATCAGATGCAACATCTGTTAGTGCTACTAATGATGCTACGAATTCGGAATTGATTCAGCTTGGTTGTGCTTGTAAAGATGAGTTAGGCATTGCCCACAGTCATTGTGCTGAGGCGTGGTTCAAGCTTAAAGGAAACAGAGTTTGTGAAATATGTGGTGAGACTGCAAAAAATGTTACGGGTACTGTCGATAATGGATTTATGGAAGAGTGGAATGAAAGAAGATTCCTTGACAGTGGTACTACCTCATCAGGCATGTTTCGTGGATGCTGGCGAGGACAGCCATTTTGTAACTTCTTGATGGCATGCCTCGTAATAGCTTTCGTTCTACCGTGGTTCTTTCATGTAAATATGTTCGGGGGGGCTGGTTGAACCCTGTTATTCCCTTGATCAATTCTCCTTCCCTGCATATGTGTAGTGGGTCTATGATTGATCCGTTCTGGCTATGATACATCAAACACATTTACTGGGTTTTTACTGCTTGAGCACGTCTAAATCGACATTTCTCTTGATCTCTGCCCTGAAGATGATGAGAAGCTTCAATTTAAGGAAGTTGCCACCTTGAC 1124 0.4244 MDQARWQRSDEVLDLVDEGIDNKLSHSAEGLAVTGDSLSERASVNGEDGTSKEMDKDLGSNKELKEGSEELTNQDMHDQQNNSETFDGVDQGTSFTSGNLVNGGGLETVVVIDSSGADNVGGDYRKLEGKVNESGLNMVSARAPKGVSERDKSSCVIDIKGSSYKGFSENLDGERTCRICHLASGQPSDATSVSATNDATNSELIQLGCACKDELGIAHSHCAEAWFKLKGNRVCEICGETAKNVTGTVDNGFMEEWNERRFLDSGTTSSGMFRGCWRGQPFCNFLMACLVIAFVLPWFFHVNMFGGAG 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00038 309 SUPERFAMILY RING/U-box 174 241 - -
Bach11g00038 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 249 IPR013083 -
Bach11g00038 309 MobiDBLite consensus disorder prediction 24 94 - -
Bach11g00038 309 MobiDBLite consensus disorder prediction 46 73 - -
Bach11g00038 309 SMART ringv_2 176 239 IPR011016 GO:0008270
Bach11g00038 309 ProSiteProfiles Zinc finger RING-CH-type profile. 169 245 IPR011016 GO:0008270
Bach11g00038 309 PANTHER ZINC FINGER, RING-CH-TYPE 50 305 - -
Bach11g00038 309 MobiDBLite consensus disorder prediction 74 94 - -
Bach11g00038 309 Pfam RING-variant domain 177 238 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00038 Bach-Chr11 284961 287221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00038 106 304 C3H Transcription Factor Family AT5G05830 37.850 2.14e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00038 - - gmx:100791129 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00038 11 284961 287221 Bach11g00038 11 284961 287221 ECH