Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00036 ATGGCCGACGATAAGGAAATGTCTGCCTCTGTTGTTAATGGGAATGATTCACTTACTGGTCACATCATATCGACAACAATTGGAGGCAAAAATGGGGAGCCGAAACAGACTATTAGTTACATGGCAGAACGTATTGTGGGATCTGGGTCATTTGGAGTTGTTTTCCAGGCAAAATGCTTGGAAACGGGTGAGACAGTTGCCATTAAAAAGGTTTTACAAGACAGAAGATATAAGAATCGTGAACTACAGCTAATGCGTGTGATGGACCATCCAAATGTGATCTCTCTGAAGCATTGTTTCTTTTCCACTACAAGTACAAATGAACTTTTTCTTAATTTGGTTATGGAATATGTTCCAGAGACCATGTTTCGGGTCTTAAAGCATTATTGTGATGCAAAACAGAGAATGCCACTTATCTATGTAAAACTTTATATGTACCAGATTTTTAGGGGGCTGGCTTATATCCACACAGTTCCTGGAGTTTGCCATAGAGATTTGAAGCCACAAAATATACTGGTTGATCCTCTTACTCACCAGGTTAAGCTCTGTGATTTTGGAAGTGCAAAAATGCTGGTTAAAGGGGAAGCTAACGTATCATACATCTGTTCACGCTTCTATCGAGCTCCAGAACTTATATTTGGTGCCACAGAATATACTACTTCAATTGATATTTGGTCGGCTGGATGTGTCCTTGCTGAACTTCTCTTGGGCCAGCCATTGTTTCCTGGCGAAAGTGCAGTGGATCAGCTTGTAGAGATTATAAAGGTGCTTGGGACGCCCACTCGGGAGGAAGTTCGCTGTATGAACCCCAATTATAACGACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGGTTTTCCACAAAAAGATGCCTCCAGAAGCAATTGATCTTGCCTCCCGGCTTCTCCAATACTCTCCGAGTCTTCGGTGTACAGCGTTAGAAGCATGTGCACATTCTTTCTTTGATGAACTCCGAGAACCCAATGCCCGTCTGCCCAATGGTCGTCCATTTCCACCTCTGTTCAACTTCAAACAGGAATTATCAGGAGCGTCTCCAGAGCTTGTTAATAAGTTGATACCTGATCATGTGAAGCGGCAAATAGGGCTACAATTTGTGCATCTGACTGGAACATAA 1143 0.4261 MADDKEMSASVVNGNDSLTGHIISTTIGGKNGEPKQTISYMAERIVGSGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSTNELFLNLVMEYVPETMFRVLKHYCDAKQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDPLTHQVKLCDFGSAKMLVKGEANVSYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHSFFDELREPNARLPNGRPFPPLFNFKQELSGASPELVNKLIPDHVKRQIGLQFVHLTGT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00036 380 CDD STKc_GSK3 35 327 IPR039192 -
Bach11g00036 380 FunFam Glycogen synthase kinase-3 beta 24 119 - -
Bach11g00036 380 SUPERFAMILY Protein kinase-like (PK-like) 39 349 IPR011009 -
Bach11g00036 380 Pfam Protein kinase domain 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00036 380 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Bach11g00036 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bach11g00036 380 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Bach11g00036 380 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00036 380 Gene3D Transferase(Phosphotransferase) domain 1 120 367 - -
Bach11g00036 380 FunFam Shaggy-related protein kinase kappa 120 367 - -
Bach11g00036 380 ProSiteProfiles Protein kinase domain profile. 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00036 380 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 5 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00036 Bach-Chr11 275304 278481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00036 46 327 Core Cell Cycle Gene Families AT3G48750 35.739 3.17e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bach11g00036 Pkinase 1.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00036 K14502 - gmx:100779909 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach7g01028 7 21319625 21324446 Bach11g00036 11 275304 278481 BWGD