Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01613 ATGGCGGAAACACCGGAAGAGCCCCTTTCCAACACCGACGTGCCGCAGTACTGGTGCTACCATTGTGACAAACGGGTGTCCATCGAAACACATGCTAATGAACCCGATGTTGCCTGCCTCGAGTGCAAGAACGGCTTCGTTGAGTCCATTGCTTCCACTTCCACTTCTCTACAGCCATCTGTTCCATCTTCTGGCTCTTCCGATCTTGTTGATGATCCGTACTTCGGGTCGCAATTTCTTCAGGTGCTTCGGCTACTCGCACAATCGGCGCGTGATGATGACGCTTCCCCTCCGCCGCCTCCAAACCCTGTATCCGGCAGAGATTATCTCAGGATTGAGCTCGATGGGTGGGATCACGATGAGGAAGACGACGATGAAGATGAAGACGATGGGGTTGAGTTTCGTGACGAAGGAGAAGGGCACGAAGAAAATGAAGAGCAGGAGGATCGACCCGTAAATGAGAATCAACATGGTGACGACGAAGATCTGCGGCGTAGGAGACGTGATGTGCTGCGACTTCGGATCAGAGATTTGGCGACTCGTACGAGGGGCATGAGGAACAGGATCTTGGATTGGACTGAGATATTGATGGGCCTGGAAGATAGTTCCATAGAATTTCGGCTTCAAGTGCCGCAATCTGATCGGTATGTAGGAAATCCAGAAGATTACGTTGATGCAGCTGAGTATGAAGCACTGCTGCAGACATTGGCGGAGAGCGACGGGGTAGGGAGGAGAGGAGCCCCACCCGCGGCAAAGTCAGCGATGGAGGCATTACCAACAGTGAAGATTGTGTCAGAGAATGAGGCTTTGGTCTGTGCGATTTGTAAGGATTTGGTGGATGTTGGAGACATGGCAAAGAGATTGCCTTGTGGGCATAAGTACCATGGGGATTGCATAGTTCCATGGTTGGGCTCTAGAAATTCATGCCCAGTATGCAGGTTTGAGCTGCCAACAGATGACAAAGAATACGAGGAGGGAAGGATTAAAAGGGCGATTGCCACTGCCAGTGGGGCATCGGGTTCCGGTGTAACTGACACAGGGTCGGGTTGA 1050 0.519 MAETPEEPLSNTDVPQYWCYHCDKRVSIETHANEPDVACLECKNGFVESIASTSTSLQPSVPSSGSSDLVDDPYFGSQFLQVLRLLAQSARDDDASPPPPPNPVSGRDYLRIELDGWDHDEEDDDEDEDDGVEFRDEGEGHEENEEQEDRPVNENQHGDDEDLRRRRRDVLRLRIRDLATRTRGMRNRILDWTEILMGLEDSSIEFRLQVPQSDRYVGNPEDYVDAAEYEALLQTLAESDGVGRRGAPPAAKSAMEALPTVKIVSENEALVCAICKDLVDVGDMAKRLPCGHKYHGDCIVPWLGSRNSCPVCRFELPTDDKEYEEGRIKRAIATASGASGSGVTDTGSG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01613 349 MobiDBLite consensus disorder prediction 117 144 - -
Bach10g01613 349 SUPERFAMILY RING/U-box 266 319 - -
Bach10g01613 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 239 319 IPR013083 -
Bach10g01613 349 MobiDBLite consensus disorder prediction 145 163 - -
Bach10g01613 349 SMART ring_2 272 312 IPR001841 -
Bach10g01613 349 Pfam Ring finger domain 272 313 IPR001841 -
Bach10g01613 349 ProSiteProfiles Zinc finger RING-type profile. 272 313 IPR001841 -
Bach10g01613 349 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 146 317 - -
Bach10g01613 349 MobiDBLite consensus disorder prediction 117 163 - -
Bach10g01613 349 FunFam E3 ubiquitin-protein ligase RING1-like 235 319 - -
Bach10g01613 349 Pfam zinc-ribbon 16 50 IPR039525 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01613 Bach-Chr10 22562022 22563071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01613 108 327 C3H Transcription Factor Family AT5G01980 39.474 1.67e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01613 - - gmx:100780991 421.394