Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01586 ATGTCTTCTGCCAGCGAATCAAAGCAATTCTTCTGCTACAAATGTGACCGCACCGTTGTCATATCCGTCTCCGCTTCGTCATCGGAACCTCTCTGCCCTCTCTGCAACCAAGGATTCCTCGAAGAGTTGGAAAGCCCTAACCCTCATGTCTCCTTAAACCCTAATCACTTTGCAGAAGGCTTCAATTCTCTCTCTTTGATCCCCTTGTTATTGTCCTCAACTTCCACCACCGTCGACCTACAAAACCCTCGCTTGTTCTCCAATGAATCCGCTTCTGGTTCTCGCTCCACAACCCGCTCCGATTCCAACATGTTCGACCCGTTTGTGTTCCTCCAGAACCGTCTTCGTGACCTTGAGGCTACCGGAACTAGCTTCCAATTCGAGATCAACCATCCTTCTGATGCAGGATTTCGTCTTCCCACCAACATTGGCGATTACTTCCTTGGTCCTGGTTTAGAGCAATTGATTCAGCAGCTGGCGGAGAATGACCCAAACCGTTATGGGACCCCACCGGCATCGAAATCTGCAATTGAGAATCTTCCAACTATTACAGTTTCTGATGAGTTGTTGAATTCGAAGATGAACCAATGTGCGGTTTGTCAGGATGAGTTCGAAAAAGGTACACTAGTAAAGCAAATGCCTTGCAAGCATGTATACCATGATAGCTGTTTACTTCCTTGGCTTGAACTGCATAACTCCTGTCCGGTGTGCCGATATGAATTACCTACTGATGACCCTGATTATGAGAATCGATCACACAGAGCCCAGGGAAATGCTGGTGCAGGGTCGAGGTCTCTTGGAAATGAGAATGAGAATGACAATGGCGGCAGTAATGAAGGAGCTAATAGACCTTTTCAGAGGACTTTTAGAATTTCCTTGAGGTATGCTTTTGGTTCCCGGGGATCTGTTCAGGAGAGTAATGAAAGGGGTTGGGGAAATATGGAAGGAGATACAGATTGA 960 0.4688 MSSASESKQFFCYKCDRTVVISVSASSSEPLCPLCNQGFLEELESPNPHVSLNPNHFAEGFNSLSLIPLLLSSTSTTVDLQNPRLFSNESASGSRSTTRSDSNMFDPFVFLQNRLRDLEATGTSFQFEINHPSDAGFRLPTNIGDYFLGPGLEQLIQQLAENDPNRYGTPPASKSAIENLPTITVSDELLNSKMNQCAVCQDEFEKGTLVKQMPCKHVYHDSCLLPWLELHNSCPVCRYELPTDDPDYENRSHRAQGNAGAGSRSLGNENENDNGGSNEGANRPFQRTFRISLRYAFGSRGSVQESNERGWGNMEGDTD 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01586 319 FunFam E3 ubiquitin-protein ligase RING1-like 158 244 - -
Bach10g01586 319 SMART ring_2 197 237 IPR001841 -
Bach10g01586 319 ProSiteProfiles Zinc finger RING-type profile. 197 238 IPR001841 -
Bach10g01586 319 Pfam Ring finger domain 195 238 IPR001841 -
Bach10g01586 319 MobiDBLite consensus disorder prediction 248 285 - -
Bach10g01586 319 SUPERFAMILY RING/U-box 176 246 - -
Bach10g01586 319 MobiDBLite consensus disorder prediction 256 285 - -
Bach10g01586 319 MobiDBLite consensus disorder prediction 300 319 - -
Bach10g01586 319 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 98 242 - -
Bach10g01586 319 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 244 IPR013083 -
Bach10g01586 319 Pfam zinc-ribbon 9 43 IPR039525 GO:0061630
Bach10g01586 319 CDD RING-H2_RNF126-like 196 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01586 Bach-Chr10 21762178 21763137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01586 141 249 C3H Transcription Factor Family AT5G01980 47.706 1.85e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01586 K11982 - tcc:18608474 337.421