Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01584 ACTCGCTCTCTTTTGCTCTCTCTTCCTTGTTTATGGAGAACAACAACATCGCCAATAACAACATCGCCAAAGCGGGTTCAGAAGGAGCCAAACCCAACAGCAACAGCATCGAAGATGTAGAGTACCCTGATTTGAATGCAGATGAACATGGACAAGTAGTAGAAGAAGAAGGCGATGATGATCAAGAAGAAAGTGGATCTGGGTCGGCTCAGTCTCCCCCTCGTCGGCTTTCCAGAACTCCTTTCACTAATCTTAGTCAGGTTGATGCTGACCTCGCCCTTGCAAGAACCCTGCAAGAGCAGGAAAGGGCATACATGATGCTGAGAATGAATAATGAAGGAAGTGATTATGGAAGCTGGGATGCTGGAAGTTATTTGCATGATGATGGGGATGATTTTGATGATCTACATGATGGAACTGATGTGGATGACAATGAGGAGGAAGAGGAGGAGGAATATGATGATGAAGATGCATTTGATGCTCATGCACATGGCGGTGCTGGAGAAAACAATAATTCTGGTATTGAATTTGACCCAGATGTCTACTCAAGTGATGAAGTCTATGCAAGAGCATTACAAGAGGCTGAAGAGAGAGAAATGGCAACTAGACTATTCGCCCTTGCAGGGATAAATGATCGGGAGGCTGAGGACACACAGGAACATGTGGCTATTTCTCAGGATGCATGGGTGGATGTTGATCCTGATGAACTTTCATATGAGGAATTACTGGCATTAAGTGAAGTAGTTGGGACTGAGAGCAGAGGTCTTTCAATTGATACTCTTGCCTCTTTGCCTTCGATTAACTACAAGATGGCAAGTGATCAACATGGAAGCAATGACTCGTGTGTCATTTGCCGGGTAGACTATGAGGATGGCGAGTCCTTGACAATCCTTTCCTGCAAACATTTGTACCATCCTGAGTGCATTAACAATTGGTTGAAAATAAACAAGGTTTGCCCTGTTTGCAGTGCTGAGGTATCTACTTCTGGGAGCAGCTTGTAGGATTTTAAAACTCTATTCTTTGCTACCATGCGAAGAAAATTTGTACAAGTTGGGGCTATTATCCCTGTTTAAGTAGCCTACCATGTTGCAGATATAGTTTCTGCTTTGTTGTATTATGCTCCTTCAGTTTTCATGCAGCATCAACGTTTCGGAATTAGTCCACTGCACTGTATATGCCTTTCTAATGGAATTACTGTCATGATGGCCAATTCTTTCT 1218 0.4335 MENNNIANNNIAKAGSEGAKPNSNSIEDVEYPDLNADEHGQVVEEEGDDDQEESGSGSAQSPPRRLSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWDAGSYLHDDGDDFDDLHDGTDVDDNEEEEEEEYDDEDAFDAHAHGGAGENNNSGIEFDPDVYSSDEVYARALQEAEEREMATRLFALAGINDREAEDTQEHVAISQDAWVDVDPDELSYEELLALSEVVGTESRGLSIDTLASLPSINYKMASDQHGSNDSCVICRVDYEDGESLTILSCKHLYHPECINNWLKINKVCPVCSAEVSTSGSSL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01584 322 ProSiteProfiles Zinc finger RING-type profile. 271 312 IPR001841 -
Bach10g01584 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 318 IPR013083 -
Bach10g01584 322 MobiDBLite consensus disorder prediction 123 146 - -
Bach10g01584 322 Pfam Ring finger domain 269 311 IPR001841 -
Bach10g01584 322 MobiDBLite consensus disorder prediction 1 23 - -
Bach10g01584 322 SUPERFAMILY RING/U-box 260 317 - -
Bach10g01584 322 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 23 320 IPR043312 -
Bach10g01584 322 MobiDBLite consensus disorder prediction 1 73 - -
Bach10g01584 322 MobiDBLite consensus disorder prediction 54 73 - -
Bach10g01584 322 MobiDBLite consensus disorder prediction 110 167 - -
Bach10g01584 322 SMART ring_2 271 311 IPR001841 -
Bach10g01584 322 FunFam E3 ubiquitin ligase BIG BROTHER-related 237 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01584 Bach-Chr10 21732798 21742643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01584 52 215 C3H Transcription Factor Family AT3G19910 51.786 2.01e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01584 K19045 - gmx:100306465 422.935