Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01557 CTATCTCTTCTTGAATCCATTTTTCCCATCTCTTAGATTTGGATCGATCTTCTCTTAAGTGGGTATTGAAAATCCCAGATTTTTTTTTTCTCATACAGAGGGCTTTTGTGGATTCGATCTGTTTATTCGGTGGTTTTTCGAAGAATCGACATGGTTGCTGGGGCGCCGCAACAACAGGAGCAGCCATATTCTCAATCACAACAGCAACAGCTGCTGCATCAACATCAGCAGCAACCTATTCCTTCTGCGCAAGAGGAGGCTTTGAAGAGGAACACAGATTGCGTCTACTTTCTCGCCTCACCCTTGACATGCAAAAAGGGAAGTGAATGTGAGTACCGCCACAGTGAGTATGCTCGGGTTAACCCTAGGGATTGCTGGTATTGGCTGAATGGTAACTGCTTGAATCTGAAATGTTCATTCCGTCACCCACCGCTTGATGGTTTCCTGGGAACACAGCCAACAACTCCCAGCGGATCAGGTGGAGCCCCATCACAACCTGCAATGACTACTGCAACACATCCACATAATTCTAGTAAACAAGCTGTACCTTGCATTTTCTTCCAAAAGGGGATTTGCTTGAAAGGCGACAGATGTGCCTTCCTGCATGGACCAAATCCAAACATTGGTAATAAAGTTCCTCTGGTGTTGGTGGCTAATCAAGGTACTGAGCCTTTGACTAGTAAGAAGGCTTTTAGTGGGGGTCTTGAGAAGACACAGGAAAGGAAAATTCCCCAAGTGAACATTGTAAAGCCCGTTGGAAATTCAGAAGCCAAACCTGTCCAGAAAATGGAAACTGCTTCACAAAGAATAGTTGGCGTTGAGAGGCATATGGCAGTGCCACCTACACAATTTGATTATGAGGCATCTAGAGTCAAGTTAGCAAATGCTCCACCAGTTGCCAATGCAACCTCTGTTGCCCGGTCTAATCATCCGAATCAGGGACGCATGTTAGATGATCATCCTAATATCCATAATGGCAAGGACAGTGATGAGTTCATGAGAGAATCCTCTCCTGGGTTTGATGTTCTTGTTGAGGATGAACTTACAAATTCAGATTACTACCATGGGGAAGATCAATTTGGAAAAGTGAGAGGTCAAGATGGAAGAAACTTGGATTCTGTTGATGAATATGATTTAGGTCATTCTGCTGGTTATAATTCAGTAGCTGAGATTGTTCGAGAAAGATTTCGTGCACCTCAAGGTTATGACTCATATGATCATCGGCAGGAACAATATGTTTGGGGACAGGAAAGGAATTCATCGGACAGAATGTTTGGGGCATCAGCCCATTTGGGAAGGAATCACCACAAATCTGGTAGTCCTGAAAATGTTGAGGTCTCAGATCTACGATTTCAGTTGTCCAAGCGGAGGAGAGTCAATGGTTTGAAATCTGTTGTCAATCATGATTACTATGACATTGACAGCCATGGTGATGAGCAAAGCTACTGGTTCTCCTCTAGAAAGGATTCCCACCAGTTACATCTGAGTGAGAATTCCCTCAGTAATCGATTCCGAGGCAGAATTAAGCTTCCAGAAATTGGTAGTGATGATCACCTAGAGAGGGAATCAGACAGAACTAGAAGTAGAAGCAGATTGTCTCCTGGAAGACAGCAAGCACCTCACCCAGGACAGCTCCAAGATAGGGTAAGAGGAAGGGTGCAAGATGACTATGAGAGGAAAAACTACAGGGCTAGACCAATGAGGAGAGAAACGAGTGATGAAAGCACTGATTTTCCTGGGCCAAAAAGTCTTGCTGAACTGAAAGGTGAAAGGAGCACAGAGAATAAGGAGCACCAATCACTTTGGAAGAGGAAAGGTTTACGAAATCACCATCAACCTGAAGATGATCTTCAGTTTGAAGGTCCAAAGCCTCTTAGTGAGATTCTGAAGGAGAAGAGAGGAGCTGAAGCTGGAGCAGCCATCACTGGCTCCCAAAGTAATAAATTATCTGGTAATAAAAGTAATAATAAGGATTCGGAAGCTACAAATTGCTCACATAACACAGTTGTCTCAGACACAGAACATGGGGTTTCACTGAAGGAAGAATCCAAGTTCCAGGTAACTGATACTGTTGGGAATGACACGGACAAAACATATTTGACTCATGGTCACTCTTCTGAAGATGGGATGATCTATAATGAAGGAATGGAGGAGCAAGAGTACGAAGCTGATGATCAGAGAGATGGTGATGGCGGATATGATTATGAGCAAGGTGATGAGGGGGAGTATAATTATGAGGAAGGTGAAAATCCAGAGCAGGAAGAATATGTGGATGATGAAGATGGGGATGATTTCGCAAAGAAGATTGGTGTTGTGCTTACTTAA 2325 0.437 MVAGAPQQQEQPYSQSQQQQLLHQHQQQPIPSAQEEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWYWLNGNCLNLKCSFRHPPLDGFLGTQPTTPSGSGGAPSQPAMTTATHPHNSSKQAVPCIFFQKGICLKGDRCAFLHGPNPNIGNKVPLVLVANQGTEPLTSKKAFSGGLEKTQERKIPQVNIVKPVGNSEAKPVQKMETASQRIVGVERHMAVPPTQFDYEASRVKLANAPPVANATSVARSNHPNQGRMLDDHPNIHNGKDSDEFMRESSPGFDVLVEDELTNSDYYHGEDQFGKVRGQDGRNLDSVDEYDLGHSAGYNSVAEIVRERFRAPQGYDSYDHRQEQYVWGQERNSSDRMFGASAHLGRNHHKSGSPENVEVSDLRFQLSKRRRVNGLKSVVNHDYYDIDSHGDEQSYWFSSRKDSHQLHLSENSLSNRFRGRIKLPEIGSDDHLERESDRTRSRSRLSPGRQQAPHPGQLQDRVRGRVQDDYERKNYRARPMRRETSDESTDFPGPKSLAELKGERSTENKEHQSLWKRKGLRNHHQPEDDLQFEGPKPLSEILKEKRGAEAGAAITGSQSNKLSGNKSNNKDSEATNCSHNTVVSDTEHGVSLKEESKFQVTDTVGNDTDKTYLTHGHSSEDGMIYNEGMEEQEYEADDQRDGDGGYDYEQGDEGEYNYEEGENPEQEEYVDDEDGDDFAKKIGVVLT 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01557 724 Gene3D - 118 189 - -
Bach10g01557 724 Gene3D - 26 95 - -
Bach10g01557 724 Pfam Zinc-finger containing family 39 93 IPR041686 -
Bach10g01557 724 MobiDBLite consensus disorder prediction 461 481 - -
Bach10g01557 724 SUPERFAMILY CCCH zinc finger 129 153 IPR036855 GO:0046872
Bach10g01557 724 MobiDBLite consensus disorder prediction 685 711 - -
Bach10g01557 724 ProSiteProfiles Zinc finger C3H1-type profile. 38 67 IPR000571 GO:0046872
Bach10g01557 724 MobiDBLite consensus disorder prediction 461 724 - -
Bach10g01557 724 MobiDBLite consensus disorder prediction 498 526 - -
Bach10g01557 724 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 132 154 IPR000571 GO:0046872
Bach10g01557 724 MobiDBLite consensus disorder prediction 7 31 - -
Bach10g01557 724 MobiDBLite consensus disorder prediction 100 125 - -
Bach10g01557 724 SMART c3hfinal6 39 66 IPR000571 GO:0046872
Bach10g01557 724 SMART c3hfinal6 128 154 IPR000571 GO:0046872
Bach10g01557 724 SMART c3hfinal6 71 94 IPR000571 GO:0046872
Bach10g01557 724 MobiDBLite consensus disorder prediction 537 584 - -
Bach10g01557 724 FunFam Zinc finger CCCH domain-containing protein 17 32 95 - -
Bach10g01557 724 MobiDBLite consensus disorder prediction 1 31 - -
Bach10g01557 724 MobiDBLite consensus disorder prediction 99 125 - -
Bach10g01557 724 ProSiteProfiles Zinc finger C3H1-type profile. 69 95 IPR000571 GO:0046872
Bach10g01557 724 ProSiteProfiles Zinc finger C3H1-type profile. 128 155 IPR000571 GO:0046872
Bach10g01557 724 MobiDBLite consensus disorder prediction 590 624 - -
Bach10g01557 724 MobiDBLite consensus disorder prediction 633 649 - -
Bach10g01557 724 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 34 722 - -
Bach10g01557 724 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01557 Bach-Chr10 20834005 20837760 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach10g01557 zf-CCCH_3 5.6e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01557 - - qsa:O6P43_032347 728.013