Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01528 ATGTTTTGTTGTTTGGCATTTTTCAAGATAACAGATCCAGATGCAGAGGTAATAGCTCTCTCTCCCAAGACCCTAATGACAACAAACAGGTTTATATGTGAGGTATGCAACAAAGGGTTTCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACATAACCTGCCTTGGAAGCTAAAGCAAAAGACCAACAAAGAGCCAAAGAAAAAGGTTTATCTGTGTCCAGAGCCCACATGCGTGCACCATGACCCTTCAAGAGCTCTTGGTGACCTCACTGGGATTAAGAAACACTATTCTCGCAAACATGGTGAGAAGAAGTGGAAGTGCGAGAAATGCTCCAAAAAATATGCCGTTCAATCTGACTGGAAAGCGCATTCCAAAACCTGTGGCACTAGAGAGTACAGATGTGACTGTGGCACTCTCTTCTCAAGGAGGGACACTTTTATCACTCATAGGGCATTTTGTGATGCACTAGCACAAGAAAGTGCAAGGCACCCTACCAACTTGAATGCTATGGGAACTCACCTATATAGCTCCAACCACATGACCTTAGGCTTATCCCAAGTTTCCCAGCTGCAAAATCAAAACCATGCAAACACTAACAACATTTTGAGCCTTGGTGGAGTTGGGGAAGCAAAATTTGAACATTTAATCCCACCTTCAAATCACTCTTTAATTGGAGCAATTCCCACTTCAGCTTTCTTCTTGAGTGACCCAACTCAAGCATTCCAAGAGCAACAATCTCCACATGGACCATTCTCAAGCAAGCAACTACAGAGCCTTATGCAGCTTCCTGATCTCCAAGGCAACACCAATAACTCCACTTCTTCTAATGTCAATATGTTTAACCTCAGCTTCTTCCCTAATAGCAGTAACACTTCAAGCAGCATAATCCATGACCAATACAACAATGTGAGTGGTAGTGACGGTGGCGGCAGCGGCAGCGGCCAAGGGACAACACTCCTCTCTAACAACCCTAGTGATCAAGTTGGAACAGGTTTTCCGTCACTCTTCAGCAACCAAGTGCAACATGAAAACATGTCATCCCCACACATGTCTGCAACCGCGCTGCTTCAGAAAGCTGCTCAAATGGGTTCAACCACAAGCACTAATGGCTCTTCTTTACTAAAAGGATTTGGTAGTTCTTCAAGCAATAGTACCAAATCTGATAGGAAAGTTTTGTCCAATAACCTTGTCGTTCTTGGAGGTGATAGTAGGGTAGAAGGTGTAAGATCAAGCATGGAAAAGGAGCAACACCATCTCAGAGGGCTAATGAACTCTCTTCCCAATGGTAACACCTCCCTTTATGGAAATGTACAGGAGAACAACCCTGGCAGATTTAACAACGTGGATGAGTCGTCTAAATTGCACCAAAATCTGGGTGTAACCTTTGGAGGGTCTGATAAGTTAACGTTAGATTTTCTTGGTGTTGGAGGAATGGTGAGAAACATGAATGGTGGATTTTCTCAAAGAGAACAACAACAACGACAACACGAGATCAATATGAGTTCTATGGATTCTGAACCCAAGTCAACAGCACAAGCAAGCCAACCTTTTGTGAGCACAATGTTTTGA 1575 0.4362 MFCCLAFFKITDPDAEVIALSPKTLMTTNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKKKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDTFITHRAFCDALAQESARHPTNLNAMGTHLYSSNHMTLGLSQVSQLQNQNHANTNNILSLGGVGEAKFEHLIPPSNHSLIGAIPTSAFFLSDPTQAFQEQQSPHGPFSSKQLQSLMQLPDLQGNTNNSTSSNVNMFNLSFFPNSSNTSSSIIHDQYNNVSGSDGGGSGSGQGTTLLSNNPSDQVGTGFPSLFSNQVQHENMSSPHMSATALLQKAAQMGSTTSTNGSSLLKGFGSSSSNSTKSDRKVLSNNLVVLGGDSRVEGVRSSMEKEQHHLRGLMNSLPNGNTSLYGNVQENNPGRFNNVDESSKLHQNLGVTFGGSDKLTLDFLGVGGMVRNMNGGFSQREQQQRQHEINMSSMDSEPKSTAQASQPFVSTMF 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01528 524 SUPERFAMILY beta-beta-alpha zinc fingers 30 127 IPR036236 -
Bach10g01528 524 MobiDBLite consensus disorder prediction 298 336 - -
Bach10g01528 524 MobiDBLite consensus disorder prediction 359 390 - -
Bach10g01528 524 FunFam protein indeterminate-domain 12-like 10 78 - -
Bach10g01528 524 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 53 IPR013087 -
Bach10g01528 524 MobiDBLite consensus disorder prediction 489 524 - -
Bach10g01528 524 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 11 500 IPR031140 -
Bach10g01528 524 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Bach10g01528 524 FunFam protein indeterminate-domain 5, chloroplastic-like 85 164 - -
Bach10g01528 524 Gene3D Classic Zinc Finger 11 78 - -
Bach10g01528 524 Gene3D Classic Zinc Finger 85 164 - -
Bach10g01528 524 SMART c2h2final6 72 102 IPR013087 -
Bach10g01528 524 SMART c2h2final6 31 53 IPR013087 -
Bach10g01528 524 SMART c2h2final6 107 127 IPR013087 -
Bach10g01528 524 Pfam Zinc-finger double-stranded RNA-binding 31 53 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01528 Bach-Chr10 16915033 16923214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01528 9 486 IDZ Gene Family AT2G02070 46.429 2.86e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach10g01528 zf-C2H2_jaz 3.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01528 K25870 - tcc:18609936 600.897