Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01508 ATGTTGGTTTCTTTCTCTCCTTATTTGAGCACCGATTGGGACTTGCTAAGTCTTCGTTTAACTGAGAGAATTCCAAGGAAATTTACCATTGAATATGGGTTTAATCTGCCAAACCCAGTGTGTCTGAAGCCTCCTGATGGTACTGAGTGGAAAATATTTTGGTCAAAGACTGATGGTGATATTTGGTTTCAAAATGGTTGGAAAGAATTTGTTAGTTGTTACTCTCTAGATAGAGGATATTTAGTGTTGTTCAAGTATGTAGACGCTTCCCATTTTGAAGTACTCTTATTTGACAAGACCACCCTACAAGTAGAGTATCCTTCTCATGTTCCTTGTGAAGAAAATCCTAACCTTGATGATCAGTTTAGTGATGACTCAATTGAAATCTTGGGTGAAAAACCTTCTCCCTTAGAGGCTAAATCGAAATCACCATTGCCTCGGCCTCAAAAGAAACAAAAGGTTGGCACAAATGGAGATTTGGAACCAAGATCTAGTCTGAAAAGCAAACATTTTCATGTCCAAACTGAAGGTAGACAATCTCAAGGTACCAAGAAAAAATTAGAAGAAGAACATCTAGAGGAAGAGGAAGGTACTCTAACCCTTGAAGTCTTGGAGAGGGGAACTTGGTCTGCTACATATGTTGGTAACAAAATAGTTTCTGGTTGGCATAGATTTGCCATAGATAATAATCTAAAAGTGGGTGATACTTGTGTTTTTGAGATCACCAATATCATTGAACTTTCATTCAAAGTTTCGATTTACCGAGCTCCTGAAGATCCAAGTTGCTCATTTTCACAAGGTGGGAAGAGTACTCAAAGAATTTCAAAATCAGTTCTTGAGAAGGTTAAAAACTTTGAGTCTGACAATCCCTATTTCACAGTTCGTATTACGCCTTGTCATTTGAAGAATAGCAAACCGTATGTACCAAGAGACTTCTACAAGAGTTGGACTACAGAAAGGGAGAAGAGCATATTGATTAAAGTGGGTAAGAGATCATGGCATGCAAAGTTGATATGTGAATGGCGGCAGAAGTCATCATCAACCCGGTTTTCTGCTGGTTGGACTGTATTTGCAAGGGAAAATAACCTGCAAGTTGGAGATGCTTGCATCTTTGAGCTGACTAATAGAGATGATGGAGAACTGCGTGCTCATATTTTCAGATGCCACCGTTAG 1173 0.3887 MLVSFSPYLSTDWDLLSLRLTERIPRKFTIEYGFNLPNPVCLKPPDGTEWKIFWSKTDGDIWFQNGWKEFVSCYSLDRGYLVLFKYVDASHFEVLLFDKTTLQVEYPSHVPCEENPNLDDQFSDDSIEILGEKPSPLEAKSKSPLPRPQKKQKVGTNGDLEPRSSLKSKHFHVQTEGRQSQGTKKKLEEEHLEEEEGTLTLEVLERGTWSATYVGNKIVSGWHRFAIDNNLKVGDTCVFEITNIIELSFKVSIYRAPEDPSCSFSQGGKSTQRISKSVLEKVKNFESDNPYFTVRITPCHLKNSKPYVPRDFYKSWTTEREKSILIKVGKRSWHAKLICEWRQKSSSTRFSAGWTVFARENNLQVGDACIFELTNRDDGELRAHIFRCHR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01508 390 MobiDBLite consensus disorder prediction 133 193 - -
Bach10g01508 390 ProSiteProfiles B3 DNA-binding domain profile. 291 389 IPR003340 GO:0003677
Bach10g01508 390 ProSiteProfiles B3 DNA-binding domain profile. 218 257 IPR003340 GO:0003677
Bach10g01508 390 MobiDBLite consensus disorder prediction 163 193 - -
Bach10g01508 390 SUPERFAMILY DNA-binding pseudobarrel domain 189 259 IPR015300 -
Bach10g01508 390 CDD B3_DNA 23 98 IPR003340 GO:0003677
Bach10g01508 390 Pfam B3 DNA binding domain 190 256 IPR003340 GO:0003677
Bach10g01508 390 Pfam B3 DNA binding domain 23 99 IPR003340 GO:0003677
Bach10g01508 390 Pfam B3 DNA binding domain 292 387 IPR003340 GO:0003677
Bach10g01508 390 CDD B3_DNA 208 255 IPR003340 GO:0003677
Bach10g01508 390 Gene3D - 156 258 IPR015300 -
Bach10g01508 390 Gene3D - 270 389 IPR015300 -
Bach10g01508 390 SUPERFAMILY DNA-binding pseudobarrel domain 23 107 IPR015300 -
Bach10g01508 390 CDD B3_DNA 290 387 IPR003340 GO:0003677
Bach10g01508 390 Gene3D - 9 101 IPR015300 -
Bach10g01508 390 PANTHER B3 DOMAIN-CONTAINING 295 376 - -
Bach10g01508 390 ProSiteProfiles B3 DNA-binding domain profile. 24 100 IPR003340 GO:0003677
Bach10g01508 390 SMART B3_2 171 257 IPR003340 GO:0003677
Bach10g01508 390 SMART B3_2 291 389 IPR003340 GO:0003677
Bach10g01508 390 SMART B3_2 15 100 IPR003340 GO:0003677
Bach10g01508 390 SUPERFAMILY DNA-binding pseudobarrel domain 285 388 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01508 Bach-Chr10 15969605 15972763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01508 278 389 B3 DNA Binding Superfamily AT3G18990 30.088 1.46e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach10g01508 B3 6.5e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01508 - - lja:Lj5g3v0508090.1 257.299