Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01496 ATGAGACCTATTTTGATGAAAGGCCATGAGAGGCCTTTGACGTTCTTGAAGTACAACAGGGATGGGGATCTTCTCTTTTCTTGCGCCAAGGATCACAATCCCACCGTTTGGTTCGCCGACAATGGTGAACGCTTGGGCACTTATCGCGGCCACAACGGCGCCGTTTGGTGCTGCGATGTATCAAGCAAGTTCCTCTTTCCTCCGCCTATCCTATGTTTGCTTCAATTTAGAGATTCCATGCGGCTAATAACGGGTAGTGCGGATCAGACAGCGAAGCTATGGAATGTACAAACTGGGCAGCAATTATTCACGTTTAATTTTGATTCTCCTGCTAGGTCTGTGGACCTTTCTGTGGGAGATAAGCTTGTTGTGATCACAACCGATCCATTCATGGAATTGTCTTCTGCCATTCATGTTAAGCGCATTGCTAGTGACCTCGGTGACCAGACTGGGGAATCTGTGCTTGTCCTCAAGGGCATTCAGGGAAGAATAAACAGAGCTGTTTGGGGACCACTAAATAAAACTATTATTAGCGCTGGGGAAGATGCTGTGGTTCGCATTTGGGATTCTGAGACAGGAAAGCTACTTAAAGAGTCAGACAAGGAGACTGGCCATAAAAAGGCTATAACATCACTTGCAAAATCTGCAGATGGTTCACATGTCCTTACTGGCTCACTGGATAAGTCTGCTAAGCTTTGGGATACCAGAACATTGACTCTTATCAAGACCTATGTGACAGAACGACCAGTGAATGCAGTTGCAATGTCTCCACTTCTTGACCATGTGGTGCTTGGAGGTGGTCAAGATGCGTCAGCTGTTACAACTACTGATCATCGTGCTGGGAAGTTTGAAGCCAAGTTCTTTGATAAGATTCTTCAAGAAGAAATTGGGGGTGTGAAAGGGCATTTTGGACCTATTAATGCATTGGCCTTCAACCCTGATGGCAAGAGTTTTGCAAGTGGTGGTGAAGATGGGTATGTACGGTTGCATCACTTTGACCCAGATTACTTCAATATCAAGATATAGGTCTGAGAGCAAATGGTTCACTTTAGCTGTGGATCCATAGGCGAAGTTAGTTTTTAATTTCTTTTACGCAATATTTATGTATTGCCAATGTGATTACTGAAGCTGTTATGTTGTTAAGAGGCAATTGTGTAGGAATTATATGCGTGAAATGATCCATTTTTGTTATGTTTGTGTGAGAACATTATCAATTTTTG 1220 0.4352 MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSSKFLFPPPILCLLQFRDSMRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDLSVGDKLVVITTDPFMELSSAIHVKRIASDLGDQTGESVLVLKGIQGRINRAVWGPLNKTIISAGEDAVVRIWDSETGKLLKESDKETGHKKAITSLAKSADGSHVLTGSLDKSAKLWDTRTLTLIKTYVTERPVNAVAMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFASGGEDGYVRLHHFDPDYFNIKI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01496 341 CDD WD40 7 329 - -
Bach10g01496 341 Gene3D - 1 341 IPR015943 GO:0005515
Bach10g01496 341 ProSiteProfiles Trp-Asp (WD) repeats profile. 157 198 IPR001680 GO:0005515
Bach10g01496 341 SMART WD40_4 292 331 IPR001680 GO:0005515
Bach10g01496 341 SMART WD40_4 1 38 IPR001680 GO:0005515
Bach10g01496 341 SMART WD40_4 41 95 IPR001680 GO:0005515
Bach10g01496 341 SMART WD40_4 192 234 IPR001680 GO:0005515
Bach10g01496 341 SMART WD40_4 150 189 IPR001680 GO:0005515
Bach10g01496 341 SMART WD40_4 237 276 IPR001680 GO:0005515
Bach10g01496 341 ProSiteProfiles Trp-Asp (WD) repeats profile. 299 329 IPR001680 GO:0005515
Bach10g01496 341 ProSiteProfiles Trp-Asp (WD) repeats profile. 6 47 IPR001680 GO:0005515
Bach10g01496 341 ProSiteProfiles Trp-Asp (WD) repeats profile. 78 104 IPR001680 GO:0005515
Bach10g01496 341 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 157 194 - -
Bach10g01496 341 ProSiteProfiles Trp-Asp (WD) repeats profile. 202 243 IPR001680 GO:0005515
Bach10g01496 341 Pfam WD domain, G-beta repeat 43 95 IPR001680 GO:0005515
Bach10g01496 341 Pfam WD domain, G-beta repeat 203 234 IPR001680 GO:0005515
Bach10g01496 341 Pfam WD domain, G-beta repeat 298 329 IPR001680 GO:0005515
Bach10g01496 341 SUPERFAMILY WD40 repeat-like 4 329 IPR036322 GO:0005515
Bach10g01496 341 PRINTS G protein beta WD-40 repeat signature 221 235 IPR020472 -
Bach10g01496 341 PRINTS G protein beta WD-40 repeat signature 82 96 IPR020472 -
Bach10g01496 341 PRINTS G protein beta WD-40 repeat signature 176 190 IPR020472 -
Bach10g01496 341 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 299 329 - -
Bach10g01496 341 Hamap Eukaryotic translation initiation factor 3 subunit I [EIF3I]. 1 341 IPR027525 GO:0003743|GO:0005737|GO:0005852
Bach10g01496 341 ProSitePatterns Trp-Asp (WD) repeats signature. 221 235 IPR019775 -
Bach10g01496 341 ProSitePatterns Trp-Asp (WD) repeats signature. 176 190 IPR019775 -
Bach10g01496 341 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 340 - -
Bach10g01496 341 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 202 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01496 Bach-Chr10 15573318 15577130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01496 1 341 Eukaryotic Initiation Factors Gene Family AT2G46290 78.134 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01496 K03246 - gmx:100793485 621.313