Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01493 ATGGTTTTCCCTAAACCATCTTCTGAATCTGATCTCTTTTTCCATTCAAATTTTGCTTCCCCCTATGCTAGCGATTCTCTTCCAAGGTTTAGCATGCCAGAGAACTCGACGCCAAAGGAGGTAGCGTACCAGAACATACATGATGAACTACAGCTTGATGGGATTCCGAAGTTGAACTTGGCTTCCTTTGTAACGACTGCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAGAACTACGTTGACATGGATGAGTACCCTGTTACCACTGAGCTTCATAACCGGTGTGTGAACATGATAGGGCGTCTGTTCAATGCGCCAATGGGAGAAGATGAGGCTGCAATTGGAGTAGGAACGGTTGGCTCTTCAGAGGCTATAATGCTAGCAGGTCTTGCATTCAAAAAGAGGTGGCAGAACAAAAGGAAAGCTCAGGGCAAGCCCTTTGACAAGCCCAACATCGTTACTGGTGCCAATGTACAGGTTTGTTGGGAGAAATTTGCAAGGTATTTTGAGGTTGAGTTGAAGGAAGTGAAGGTTAGGGAAGGATACTATGTGATGGACCCAGCCAAAGCTGTTGAGATGGTAGATGAGAACACTATCTGTGTGGCTGCAATTCTTGGCTCAACTTACAATGGAGAATTTGAAGATGTGAAGCTCTTAAATGACCTTTTGCTAGAAAAGAACAAGCAAACTGGATGGGATACACCCATTCATGTTGATGCTGCTAGTGGTGGCTTTATTGCCCCTTTCCTTTACCCAGAGCTTGAATGGGATTTCAAGCTTCCATTGGTGAAGAGTATCAATGTTAGTGGCCACAAGTATGGTTTAGTCTATGCTGGAATTGGTTGGGTTCTGTGGAGGAGCAAAGAGGACTTACCTGAGGACCTCATTTTTCATATTAATTACCTTGGTGCTGACCAACCCACCTTCACTCTCAATTTTTCCAAAGGTTCTAGCCAGATCATTGCTCAATATTATCAGTTAATTCGCTTAGGAAAAGAGGGTTATCGAAGTGTGATGGAGAATTGTAGAGACAATGCTATGGTGCTAAAGGAAGGATTGGAGAAAACTGGATGCTTTAACATACTTTCAAAGGACAATGGTGTTCCTGTGGTAGCCTTTTCTCTCAAGGACACAAGCCATTACAATGAGTACGTAATATCGGAGAAACTGCGCCGCTATGGCTGGATTGTTCCAGCATATCCAATGCCACCTGCAGCTCAGCATATTAATGTGCTCCGGGTTGTCATTAGGGCAGAGTTTGCACGCACACTCGCTGAACACCTTGTGCATGACATAAAAAATGTGTTGCATGAGCTTCAAAAACTTCCACCTAAGCACACTACCAAGGTGAGCCATGAGATTAAGGAAGAGAAGGCAGTGGATGAAACCGCTGGGCTCAAGAGGACTGCTTTGGATGCACAGAGGGAAATTATTACCCAAGAAGCCAACAAGAGGCAGAAAATCTTGGCAGCCTAG 1491 0.4447 MVFPKPSSESDLFFHSNFASPYASDSLPRFSMPENSTPKEVAYQNIHDELQLDGIPKLNLASFVTTAMEEECNKLIMESINKNYVDMDEYPVTTELHNRCVNMIGRLFNAPMGEDEAAIGVGTVGSSEAIMLAGLAFKKRWQNKRKAQGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFKLPLVKSINVSGHKYGLVYAGIGWVLWRSKEDLPEDLIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGKEGYRSVMENCRDNAMVLKEGLEKTGCFNILSKDNGVPVVAFSLKDTSHYNEYVISEKLRRYGWIVPAYPMPPAAQHINVLRVVIRAEFARTLAEHLVHDIKNVLHELQKLPPKHTTKVSHEIKEEKAVDETAGLKRTALDAQREIITQEANKRQKILAA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01493 496 FunFam Glutamate decarboxylase 361 448 - -
Bach10g01493 496 FunFam Glutamate decarboxylase 4 65 - -
Bach10g01493 496 FunFam Glutamate decarboxylase 66 360 - -
Bach10g01493 496 CDD DOPA_deC_like 59 438 - -
Bach10g01493 496 Gene3D - 361 448 - -
Bach10g01493 496 Gene3D - 1 65 - -
Bach10g01493 496 NCBIfam glutamate decarboxylase 17 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bach10g01493 496 PANTHER GLUTAMATE DECARBOXYLASE 6 489 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bach10g01493 496 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bach10g01493 496 Gene3D - 66 360 IPR015421 GO:0003824
Bach10g01493 496 SUPERFAMILY PLP-dependent transferases 17 446 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01493 Bach-Chr10 15414847 15417900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01493 1 484 Calmodulin-binding Proteins AT5G17330 77.160 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01493 K01580 - gmx:100782330 853.588