Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01470 ATGATAGATAATAGAGCTTCTTCTGGTTCTGGTTCTGGTCCACCTTCATCAGATGCCTTGGCTTCCTCAGAAAATGGGGTATGTAGCAAAAGAAAACGAAGACCAGCAGGCACACCAGATCCAGATGCTGAGGTTGTGTCTCTATCGCCCAAGACCCTTTTGGAATCTGATCGATATGTGTGTGAGATCTGCAACCAAGGGTTTCAAAGGGACCAGAATCTTCAGATGCATAGGCGAAGGCATAAGGTGCCATGGAAATTGTTGAAGAGGGAAACACAAGAGGTCAAGAAGAAGGTGTTTGTTTGCCCTGAACCAAGCTGTTTGCACCATGACCCTTGCCATGCTCTTGGTGATCTTGTTGGGATCAAGAAGCACTTCAGAAGAAAGCATAGCAATCAGAAGCAGTGGGTTTGTGACAAGTGCTCCAAAGGATACGCTGTTCAATCTGATTACAAAGCACATCTCAAAACCTGTGGAACTAGAGGCCATTCCTGTGACTGTGGCCGTGTCTTTTCAAGGGTGGAGAGCTTCATTGAACATCAAGATGCCTGCACCGTCCGGCAGTTCCGGCCGGAGTTACAGGCGGTGCAGCCGGCATGCTCTTCACGAACAGCTTCTAGCACAAGTCCATCTAGTGAGGCCAATTTTAGCACTATATCCCCCTTGCAAGGCTTGCCATTACAAAAAGCAGCTGACCAGAACAATCAACCTGTGTTGCTAACCAAGGAAATCATACAAAATAACAATAACAAGCCTTGCAAGTCTGATCTGCAACAACATAATTTGGAGCTTCAGCTCTTGCCTTCATCAAATGCCCAAGTGAGAAGAAATTCGGAGGACAACAACGAAAAACATTTGAAACTTTCAATAGGTTCATGTAACAGTGATGAGAAGAGTCAACAAAGAAGTGAAGTAGACAGAGGAAGATTAGAGAGGACTATGAGTGAACCCAGATTGGAAGTAGCGAGGTTGAAAGAGTTTACTAGTGAGGAGCTCAAGTTGGCCATGGCTGAAGAGGCCTATGCAAAAGAGGCAAGAAGAGAAGCTAAGCGTCAAATTGAGATAGCTGAAGTTGAGTTCGCTAATGCAAAAAGCATAAGGAAACAAGCACAAGCTGAGCTAGAAAAAGCTGAAGCCTTGAAAAAGCAAGCAACGAAGAAGATGAGCTCTACCCTTATGCAAATAACTTGTCAAGTTTGCAAGCAACAGTTTCAGTCTTCAACTCTAACTGGGGTTCCATCAGATCAAGAGACTTCTCTTGCAACGAGTTACATGTCCTCAGCCACAACGGAAGGGGAAGGAGAGTAA 1308 0.4503 MIDNRASSGSGSGPPSSDALASSENGVCSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKKVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNQKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRQFRPELQAVQPACSSRTASSTSPSSEANFSTISPLQGLPLQKAADQNNQPVLLTKEIIQNNNNKPCKSDLQQHNLELQLLPSSNAQVRRNSEDNNEKHLKLSIGSCNSDEKSQQRSEVDRGRLERTMSEPRLEVARLKEFTSEELKLAMAEEAYAKEARREAKRQIEIAEVEFANAKSIRKQAQAELEKAEALKKQATKKMSSTLMQITCQVCKQQFQSSTLTGVPSDQETSLATSYMSSATTEGEGE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01470 435 MobiDBLite consensus disorder prediction 408 435 - -
Bach10g01470 435 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 81 IPR013087 -
Bach10g01470 435 SMART c2h2final6 100 130 IPR013087 -
Bach10g01470 435 SMART c2h2final6 59 81 IPR013087 -
Bach10g01470 435 SMART c2h2final6 136 163 IPR013087 -
Bach10g01470 435 Pfam Zinc finger, C2H2 type 59 81 IPR013087 -
Bach10g01470 435 MobiDBLite consensus disorder prediction 1 46 - -
Bach10g01470 435 MobiDBLite consensus disorder prediction 268 311 - -
Bach10g01470 435 MobiDBLite consensus disorder prediction 1 24 - -
Bach10g01470 435 Coils Coil 346 394 - -
Bach10g01470 435 MobiDBLite consensus disorder prediction 200 219 - -
Bach10g01470 435 Gene3D Classic Zinc Finger 37 103 - -
Bach10g01470 435 Gene3D Classic Zinc Finger 121 198 - -
Bach10g01470 435 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 401 IPR031140 -
Bach10g01470 435 FunFam protein indeterminate-domain 12-like 38 106 - -
Bach10g01470 435 SUPERFAMILY beta-beta-alpha zinc fingers 58 156 IPR036236 -
Bach10g01470 435 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01470 Bach-Chr10 14688242 14690561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01470 24 435 C2H2 Transcription Factor Family AT2G01940 57.014 3.62e-157 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach10g01470 zf-C2H2 0.0041 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01470 K25871 - cpap:110823858 561.607