Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01438 TCAACAACCATTATATAGTGTTGAACACTAGGCAAAAGCGCACAATCCCTTCTTGAGGCTGCTGACACTCTTCTCAGTCCCAGGCAGTGAAGGAGCCTGCTGTTTTATCGTACGGTACTATATGAAGGTAAGTTGACCCACAGCAAGCGAGTTCTTCTGTCCCAATTGCACATAGGGAAAGAAATTAGCTCTTGAAAAATGATGACACCAAATTTGAACTTGGAACCTGAAAATAATTCAGAAGGAAGCAGCCAAGTATCCTCCAACGTCTCCATGCAGGAAACGTCCCATGATCGTACCAAAGACAGCACAACTACTTCTTCCTGTCTTACTAAGTCTGAACCTGATCAAGGGTCTTTTTCCCTTGACTTGGCACTCAACTTTAGTTCTAGTGATGGCGAATTAAAGGGTACAAGTGATGCTTGCAGTGAAGTAGGAGCTGATGCTCATCCTTCAGCAACTGCTATTCCAAGGGTTTTCTCATGTAATTACTGTAGGCGTAAGTTCTTCAGTTCACAGGCATTAGGTGGTCATCAGAATGCTCATAAAAGGGAGAGAACAATGGCAAAGCGCGCAATGCGAATGGGGATGCTCACTGATAGGTACACAAGCTTGGCATCTCTTCCCCTTCATGGTTCTGCTTTTAGGTCTCTTGGCATTGAAGCTCATTCTGCAATGCACCAATTCCAAAGACATGTGCCATCACCACAGATGGCTCCTTATACGAGACCTGCAGCAAAATTTCAGAAGGACTATTTTGGGACACCAATCTTCATGGAAGATGATGATGCGAGTCTAGTTTGGCCTGGGAGTTTCCGGCAGGTCGATGCCGGTTCTAGCATTGCCCAAGGACATGAACATGCTCAAAACTCAAACACTAGTATACTAGCAATGCCAATGGCACCTCCACAACAAACACCTTCATCTCTTGATCTTACACTGAAGCTCTGAATGATGACACCAAATTTGAACTTGGAACCTGAAAATAATTCAGAAGGAAGCAGCCAAGTATCCTCCAACGTCTCCATGCAGGAAACGTCCCATGATCGTACCAAAGACAGCACAACTACTTCTTCCTGTCTTACTAAGTCTGAACCTGATCAAGGGTCTTTTTCCCTTGACTTGGCACTCAACTTTAGTTCTAGTGATGGCGAATTAAAGGGTACAAGTGATGCTTGCAGTGAAGTAGGAGCTGATGCTCATCCTTCAGCAACTGCTATTCCAAGGGTTTTCTCATGTAATTACTGTAGGCGTAAGTTCTTCAGTTCACAGGCATTAGGTGGTCATCAGAATGCTCATAAAAGGGAGAGAACAATGGCAAAGCGCGCAATGCGAATGGGGATGCTCACTGATAGGTACACAAGCTTGGCATCTCTTCCCCTTCATGGTTCTGCTTTTAGGTCTCTTGGCATTGAAGCTCATTCTGCAATGCACCAATTCCAAAGACATGTGCCATCACCACAGATGGCTCCTTATACGAGACCTGCAGCAAAATTTCAGAAGGACTATTTTGGGACACCAATCTTCATGGAAGATGATGATGCGAGTCTAGTTTGGCCTGGGAGTTTCCGGCAGGTCGATGCCGGTTCTAGCATTGCCCAAGGACATGAACATGCTCAAAACTCAAACACTAGTATACTAGCAATGCCAATGGCACCTCCACAACAAACACCTTCATCTCTTGATCTTACACTGAAGCTCTGAGATTTTGCATCATAAATCTCATTGTCTTCCTGCATGGAACT 1745 0.4476 MMTPNLNLEPENNSEGSSQVSSNVSMQETSHDRTKDSTTTSSCLTKSEPDQGSFSLDLALNFSSSDGELKGTSDACSEVGADAHPSATAIPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMLTDRYTSLASLPLHGSAFRSLGIEAHSAMHQFQRHVPSPQMAPYTRPAAKFQKDYFGTPIFMEDDDASLVWPGSFRQVDAGSSIAQGHEHAQNSNTSILAMPMAPPQQTPSSLDLTLKL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01438 250 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Bach10g01438 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Bach10g01438 250 FunFam Zinc finger protein 2 73 140 - -
Bach10g01438 250 MobiDBLite consensus disorder prediction 36 51 - -
Bach10g01438 250 SUPERFAMILY beta-beta-alpha zinc fingers 92 122 IPR036236 -
Bach10g01438 250 Gene3D Classic Zinc Finger 83 141 - -
Bach10g01438 250 MobiDBLite consensus disorder prediction 1 28 - -
Bach10g01438 250 MobiDBLite consensus disorder prediction 231 250 - -
Bach10g01438 250 MobiDBLite consensus disorder prediction 1 51 - -
Bach10g01438 250 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 14 250 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01438 Bach-Chr10 14043104 14046392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01438 92 250 C2H2 Transcription Factor Family AT1G66140 46.703 1.66e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach10g01438 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01438 - - gmx:100777133 322.398