Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01437 TCAGCGGCAATAAAACCCTAATTTTATTTTGAGAGAAGAGAAGATTCAGAAGAAATCGAAGGTGGGTTTTGCCGCTGAAGCACGGAATCAAAATCGAAACCGATATTGAAATCGAAGTTCCTTAGAGAACCATGGGGAAGAAGAAGAAGAGGGTTTCTTCCAAGGTGTGGTGTTACTACTGCGATCGGGAATTCGACGACGAGAAGATTTTGGTTCAGCATCAAAAAGCTAAGCATTTCAAGTGCCATGTCTGCCATAAGAAGCTATCCACCGCTGGTGGCATGGCCATCCATGTCCTTCAGGTCCACAAGGAGTCCGTCACCAAGGTGCCCAATGCAAAATCTGGCAGAGAGTCAACTGATATTGAAATATATGGAATGCAAGGGATTCCACCTGACATATTGGCTGCTCATTATGGAGAGGAAGATGATGAGGTTCCATCAAAGGCAGCTAAAGTGGATACACCATCAACCCATCTTGTTGGGGGAGTGGTGCCAGCACCTTTGGGCATGGCATATCCTCCTCAACCAACCTTGGGCGCTGTGCCTCCAATTTACAATCCTGCTGTACCCATGCCTCCAACAGCTTGGGCAGTTCCTCGACCTCAGCCTTGGTACTCTCAACCTCCTGTTCGTTCAGTTCCTCCTCCTGCCCCATATGTACAGCAGCCATTATTTCCTGTGCAGAATATGAGGCCACCTCTACCATCAACTGCTTCTCCTGCACTCCCAACTTCTCAGATTACTCCTCCTGGATTGCCTACATCTAGTCCTTCTGTTCCAGTTTCTCAACCCTTGTTTCCTGTTGTTGGAAATAACCATACGCCTGTGCAGAGTTCAACATTTGCCACCCCTTCACCATCTACAAGTGTTCCATCAATAAGTCCAGTACTCCCTGCAAGTACCCCTGTTGATGCACACTCAGGAGCCAACTCTTCTGTGACAAATAGTTATCTGGCCCTAGGGGTTTCAGGAGGGACAGCTAGTAACTCACATTCTTATGCTTCTGGTCCAAATACTGGAGGTCCTTCAATTGGACCACCTCCAGTAATTTCAAACAAAGCTCCTGCACCTCAGCCTGCAGTTAACGAGGTCTATTTAGTTTGGGATGATGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTGCCAAAATATCAGGTGCATGATGAAACTAGCCAGGTAAGTCATACTACCTCTTTAATACATGGAGTTGTTTTCACATCTAACCAGATGGGTAGGTTTTATGCTTCTTGTTTTCAGATTCGGTTGTTTACACATTGTTTCCTATTCATAGAGATGAGCTCCATTGATGCAGCCATAGACAAGAGGATACTTGAAAGTAGGCTGGCTGGGCGTATGGCATTTTAG 1370 0.4606 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKSGRESTDIEIYGMQGIPPDILAAHYGEEDDEVPSKAAKVDTPSTHLVGGVVPAPLGMAYPPQPTLGAVPPIYNPAVPMPPTAWAVPRPQPWYSQPPVRSVPPPAPYVQQPLFPVQNMRPPLPSTASPALPTSQITPPGLPTSSPSVPVSQPLFPVVGNNHTPVQSSTFATPSPSTSVPSISPVLPASTPVDAHSGANSSVTNSYLALGVSGGTASNSHSYASGPNTGGPSIGPPPVISNKAPAPQPAVNEVYLVWDDEAMSMEERRMSLPKYQVHDETSQVSHTTSLIHGVVFTSNQMGRFYASCFQIRLFTHCFLFIEMSSIDAAIDKRILESRLAGRMAF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01437 412 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Bach10g01437 412 PANTHER ZINC FINGER PROTEIN 207 1 412 - -
Bach10g01437 412 MobiDBLite consensus disorder prediction 191 215 - -
Bach10g01437 412 SMART c2h2final6 12 35 IPR013087 -
Bach10g01437 412 SMART c2h2final6 36 59 IPR013087 -
Bach10g01437 412 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Bach10g01437 412 MobiDBLite consensus disorder prediction 287 313 - -
Bach10g01437 412 CDD SUF4-like 13 92 - -
Bach10g01437 412 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Bach10g01437 412 Gene3D Classic Zinc Finger 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01437 Bach-Chr10 14016448 14021286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01437 1 372 C2H2 Transcription Factor Family AT1G30970 63.918 3.37e-149 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach10g01437 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01437 - - gsj:114413692 608.601