Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach10g01370 | ATGAGAACCAAACGGCCTCATTTCTTCCTTCCCCTCCTCCTCGTAGCAGCCACATTCTTCCATCTCCACCCAACTGCCACCGCTACCGACGGCGATGGCGAAGTCTACGGCGACATCAAGGCCACCGATTACATTCGTACAAGTTGCAACGTAACTCTCTACCCTGATGTATGCTTCTCTTCTCTCTCTCGCTACGCCAATGCTGTCCAACAGAACCCAGCTCAGCTAGCTCGCGTCGCCATAGCCGTGAGCCTCTCCAAGGCGCACCACATAGCCTCCTACATCAACAACCTCACTCGCGAAGCCGATTACAGTACCAGCTCCCGAGCCACCTCCGCCCTCCATGACTGTTTCTCCAATCTCGGCGACGCCGTCGACGAAATCCGCGGCTCGCTCAAGCAGATGCGCCAGATTGGCGCCGCCGGAGCCGACGGCGAGTCATTCAGATTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCGGCGCTTACCGACGAAGAAACGTGTACGGACGGATTCGAGGACGTGCCGGACGGTCCCGAGAAAACGGATGTATGTGATCGCGTCACTAGAGTGAAGAAATTCACCAGCAATGCGCTTGCGCTGGTGAATCGCTATGCTAACCAAGGAATCCCTTAG | 639 | 0.5665 | MRTKRPHFFLPLLLVAATFFHLHPTATATDGDGEVYGDIKATDYIRTSCNVTLYPDVCFSSLSRYANAVQQNPAQLARVAIAVSLSKAHHIASYINNLTREADYSTSSRATSALHDCFSNLGDAVDEIRGSLKQMRQIGAAGADGESFRFQMSNVQTWMSAALTDEETCTDGFEDVPDGPEKTDVCDRVTRVKKFTSNALALVNRYANQGIP | 212 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach10g01370 | 212 | NCBIfam | pectinesterase inhibitor domain | 14 | 206 | IPR006501 | GO:0004857 | |
| Bach10g01370 | 212 | Pfam | Plant invertase/pectin methylesterase inhibitor | 44 | 202 | IPR006501 | GO:0004857 | |
| Bach10g01370 | 212 | SMART | PMEI_2 | 40 | 202 | IPR006501 | GO:0004857 | |
| Bach10g01370 | 212 | CDD | PMEI-like_3 | 47 | 208 | - | - | |
| Bach10g01370 | 212 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 39 | 206 | IPR035513 | - | |
| Bach10g01370 | 212 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 43 | 206 | IPR035513 | - | |
| Bach10g01370 | 212 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 12 | 202 | - | - | |
| Bach10g01370 | 212 | FunFam | Pectin methylesterase inhibitor 1 | 40 | 206 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach10g01370 | Bach-Chr10 | 12133882 | 12134520 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach10g01370 | 2 | 202 | Carbohydrate Esterase | AT5G53370 | 28.019 | 8.33e-15 | 70.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach10g01370 | - | - | gmx:100812251 | 310.842 |