Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01369 ATGGACAAGCATGTGTTGACCTATTCCTGTTGCATTGCCTTCCTTTTAATCTATTCTCTCATGGTTGTGTATGGTGATGAGATTCCCAGATCATGCAGCCAAACCCCACATCCTCATGTGTGCAACCATTATATGGGATCTGCTAAGAGATTACTTCCAACCCTTGTTGCTTCTTCTTCCTTCCATGATATGGCCCTTAGGGTTACCATGGACCAAGCCATTGAAGCACACAACCTTGTCTCAACCATGAAACTGAATAATTTCAATAACAAGTTCGCCAAATTGGCTTGGAAAGATTGTTTGGAGCTCTATGAGGACACAGTGAGCAAACTCAACCGTTCAATGAGTTCAAACAATCCAAACGATAGGTTAACTTGGCTAAGTGCTTCCATTGCTAACCAACAAACTTGCCAAAACGGCTTCCTAGACTTCAACCTTTCTTCTCACTTGAACTACTTCCCAAACATGTTAACCAACTTCTCCAAGCTGGTTAGCAATTCATTAGCCATAAACAATGCTATGGCTTCAGCTTCATCATCTACCTTGGTGAACAGCAAACAAAATGGTGGTGGGAGAAGGTTACTTTCCGATCATGGCTTCCCCAAATGGCTATCAGCTTCAGATAGAAAGCTTCTTCGGGCAACAAGGCCAGGTCCCAAAGCTGATATAGTGGTAGCACAAGATGGAAGAGGGAATTATAAGACCATATCTGAGGGTGTTGCTGCAGCTTCAAAGCTGGGTGGTAGGCGAGTTGTGGTGTATGTGAAAGCTGGTGTTTACAAGGAAAATGTTGTGGTTAAGAAGTCAGTGAAGAATTTGATGATTGTTGGAGATGGGATTGATGCAACTACTGTTACGGGTAGCAAGAGTGCACAAGTAACCACCACTTTTCGTTCTGCTACTTTTGCGGTTTCTGGTGAGGGCTTCATCGCCAGAGACATCACCTTTGAGAACACAGCCGGACCACAGAAGCACCAAGCGGTGGCTCTCCGCTCTGGCTCCGATCACTCAGTGTTCTACCGCTGCAGCTTTAAAGGATACCAAGACACCTTATATGTCCACTCCCATCGCCAATTCTACCGTGATTGTGATATCTACGGCTCCGTAGACTTCATCTTCGGCGACGCCGCGGCCGTGTTGCAGAGCTGCAACATCTACGTCAGAAAACCGATGAGCAACCAGCAGAACACGGTGACAGCTCAGGGGAGAAAAGATCCAAATGAGAACACAGGCATTATCATCCATAACTCACGTATAATAGGTTCTGCAGGTTTAGGCTCAACCAAAACCTTTCTGGGGCGGCCATGGAAGAAGTATTCAAGGACAGTGGTGATGAAGAGTTCTCTAGACGGGTCAATTAACCCGGCCGGGTGGGCCCCATGGAATGGCAACTTTGCTTTGAGCACTCTCTATTATGGTGAGTATATGAATTCAGGGCCTGGAGCTGACACTTCAAGGAGGGTCAAGTGGCCAGGGTTTCGTATCATCACTAGACCAACTGAGGCTGGGAAGTTCACCGTTGGGAATTTCTTGGACGGAGACGCGTGGATTCCCGGCACCGGCGTGCCGTTTGACGCTGGATTGTGA 1587 0.4701 MDKHVLTYSCCIAFLLIYSLMVVYGDEIPRSCSQTPHPHVCNHYMGSAKRLLPTLVASSSFHDMALRVTMDQAIEAHNLVSTMKLNNFNNKFAKLAWKDCLELYEDTVSKLNRSMSSNNPNDRLTWLSASIANQQTCQNGFLDFNLSSHLNYFPNMLTNFSKLVSNSLAINNAMASASSSTLVNSKQNGGGRRLLSDHGFPKWLSASDRKLLRATRPGPKADIVVAQDGRGNYKTISEGVAAASKLGGRRVVVYVKAGVYKENVVVKKSVKNLMIVGDGIDATTVTGSKSAQVTTTFRSATFAVSGEGFIARDITFENTAGPQKHQAVALRSGSDHSVFYRCSFKGYQDTLYVHSHRQFYRDCDIYGSVDFIFGDAAAVLQSCNIYVRKPMSNQQNTVTAQGRKDPNENTGIIIHNSRIIGSAGLGSTKTFLGRPWKKYSRTVVMKSSLDGSINPAGWAPWNGNFALSTLYYGEYMNSGPGADTSRRVKWPGFRIITRPTEAGKFTVGNFLDGDAWIPGTGVPFDAGL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01369 528 CDD PMEI-like_3 31 176 - -
Bach10g01369 528 SMART PMEI_2 23 170 IPR006501 GO:0004857
Bach10g01369 528 ProSitePatterns Pectinesterase signature 1. 247 266 IPR018040 -
Bach10g01369 528 SUPERFAMILY Pectin lyase-like 218 527 IPR011050 -
Bach10g01369 528 FunFam Pectinesterase 29 174 - -
Bach10g01369 528 NCBIfam pectinesterase inhibitor domain 13 174 IPR006501 GO:0004857
Bach10g01369 528 FunFam Pectinesterase 217 528 - -
Bach10g01369 528 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 174 IPR035513 -
Bach10g01369 528 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 175 IPR035513 -
Bach10g01369 528 PANTHER PECTINESTERASE 15 518 - -
Bach10g01369 528 Pfam Pectinesterase 222 514 IPR000070 GO:0030599|GO:0042545
Bach10g01369 528 Gene3D - 218 528 IPR012334 -
Bach10g01369 528 Pfam Plant invertase/pectin methylesterase inhibitor 28 170 IPR006501 GO:0004857
Bach10g01369 528 ProSitePatterns Pectinesterase signature 2. 365 374 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01369 Bach-Chr10 12121057 12123467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01369 10 528 Carbohydrate Esterase AT1G23200 56.250 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01369 - - lja:Lj4g3v3099630.1 708.753