Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01316 ATGAGAAAGCCTTGCTGTGATAAGCAAGACATGAACAAAGGAGCTTGGTCCAAACAGGAAGACCAGAAGCTTATAGATTACATCCAGAAACATGGCGAGGGTTGCTGGAGAACTCTCCCTCAAGCTGCAGGCTTACTTCGCTGTGGCAAAAGTTGTAGGCTGAGATGGATAAACTATCTACGGCCTGACCTTAAAAGAGGCAAGTTTGCTGAAGATGAAGAGGATCTCATCATCAAGCTTCATGCGCTGCTAGGCAACCGGTGGTCACTGATAGCTGGAAGATTACCAGGAAGGACAGATAATGAAGTGAAGAACTACTGGAACTCTCATCTCAGAAGAAAGCTCATTAACATGGGTATTGATCCAAATAATCATCGCATAAGTTGTAAAACCCCATATCTTAAAAATGCAGCAACCTTACATAGCTCAGCTTCATCTGAGTCCGAAGAAAATGCCAACAAGAATGAGCCAACAAAACCCCATGATTGTGAAAATAACAGTGATCTTGTATCAGATGCTGCAAGTGGCTTGGAAGATGATCAGTCAGATGGCTTGCCGGATTTGAACCTTGATCTCAATATAAGCATCCCTTCATCTTCCCCTCCAACTTTCCCTTGTGTTCCAAAAGATAAACCGAAGCCAATTCTTGAATCCGAAACAAGAGATCCACATTTTTTCTCCTCTCCTACGCTTCTTCTGTTTCAATAA 708 0.428 MRKPCCDKQDMNKGAWSKQEDQKLIDYIQKHGEGCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGKFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINMGIDPNNHRISCKTPYLKNAATLHSSASSESEENANKNEPTKPHDCENNSDLVSDAASGLEDDQSDGLPDLNLDLNISIPSSSPPTFPCVPKDKPKPILESETRDPHFFSSPTLLLFQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01316 235 Gene3D - 13 65 - -
Bach10g01316 235 Gene3D - 67 164 - -
Bach10g01316 235 CDD SANT 68 111 IPR001005 -
Bach10g01316 235 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Bach10g01316 235 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bach10g01316 235 MobiDBLite consensus disorder prediction 140 222 - -
Bach10g01316 235 CDD SANT 15 60 IPR001005 -
Bach10g01316 235 FunFam MYB transcription factor 67 128 - -
Bach10g01316 235 MobiDBLite consensus disorder prediction 152 166 - -
Bach10g01316 235 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 166 - -
Bach10g01316 235 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bach10g01316 235 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bach10g01316 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bach10g01316 235 FunFam MYB-related transcription factor 12 65 - -
Bach10g01316 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bach10g01316 235 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bach10g01316 235 SMART sant 65 113 IPR001005 -
Bach10g01316 235 SMART sant 12 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01316 Bach-Chr10 11201742 11203186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01316 2 206 MYB Transcription Factor Family AT4G38620 51.965 1.07e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach10g01316 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01316 K09422 - rcu:8258211 305.064