Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01304 ATGGCAGAATTCTCACTCTCAGAGACATATGCTTGTTCACCCTCCACCGAACGTGGCCGGGGCATCCTGATTTCAGGCGACCCGAGGTCCAACAACATCCTGTACTGCACGGGCCGATCCGTCATGATCCGCAATCTCGGCAACCCGCTTCAGGTTTCCGTCTACGGCGAGCACGCTTACCCCGTCACGGTGGCACGATACTCGCCCAACGGCGAGTGGATTGCTTCTGCTGACGTCTCTGGGACCGTTCGGATATGGGGGACGCACAATGATTTCGTCCTCAAGCATGAGTTTCGAGTCCTATCAGGTCGGATCGATGATCTCCAGTGGTCCTTCGACTGTTTGAGGATTGTCGCCTGCGGCGATGGCAAGGGCAAGTCCTTCGTTCGCGCTTTTGCGTGGGATACAGGCACCACTGTTGGGGATTTTGATGGCCATTCACGGCGCGTTTTGAGTTGCGCATTCAAACCAACAAGGCCTTTCCGCATTGTCACTTGTGGAGAAGACTTTGTAGTGAATTTTTATGATGGCCCACCATTCAAGTTCAACATGTGCATCAGGGAGCACTCCAATTTTGTCAATTGTGTTAGATATTCTCCAGATGGGAGCAAATTTATTACTGTGAGCTCAGATAGGAAGGGTATTATATATGAAGGAAAGACTGGACAAAAACTTGGAGAGCTGGCTTCCGAGGATGGTCACAAGGGCACCATATATGCTGCTAGTTGGAGTCCTGACAGTAAACAGGTACTTACTGTGTCTGCTGACAAGACTGCAAAAGTATGGGACATTCTTGAGGATGGTAGTGGAAAAGTAAATAAGACACTGGCACATACTGAAACTGGTGGGGTGGAGGATATGCTTGTTGGTTGTCTTTGGCAGAATGATCATCTTGTTGTTGTATCCCTGGGCGGCATGATTAATTTATATTCTGCAAAGGATTTAGATCAAAGCCCATTATCATTTTCTGGTCACATGAAGAATATCACTGCTTTGACGTTAGTCAACAGAAGTGATAAGCTACTTTTGTCCTGCAGTTATGATGGTCTGATTATGAAATGGATTCCAGGCGTTGGATACAGTGGCAAATTAGATAGCAAACCTATTGGGCAAATTAAATTGTTAATAGCTGGTGAAGAAGAAATTGTTACATCTGGGTTTGACAACAAGGTATGGAGAGCTCCTCTGCATGGGGATAATTTGGGATCTGCAGAGCATGCTGACGTTGGCAGTCAGCCAAAGGACCTGAGCATAGCCCGTAGTTCACCTGAGCTTGCTCTAGTTGCAATTGAGTCTGGGCTTGTCTTGCTCAATGGTTTAAAAGTCATCTCAACTATCAATCTAGACTTCACTGTGACTGCATGTGCTATTGCACCTGATGGTAATGAAGCAATTGTAGGTGGACAAGATGGTAAATTGCACATATATTCTGTGTCAGGAGATACTTTCACAGAAGAGACTGTTCTTGAGAAACACCGTGGAGCAATCAATGTAATCCGATATTCTCCAGATGTTTCCATGTTTGCATCAGCTGATTTAAATCGTGAAGCTGTTGTTTGGGATCGTGCATCCAAAGAGGTGAAGCTTAATAACATGCTGTTTCACACTGCACGTATTAACTGCCTAGATTGGTCACCTGATAGCACCCTGGTAGCTACTGGTTCTCTCGATACGTGTGTCATTATATATGAAATTGGAAAGCCAGCATCTAGCCGCATAACCATAAAAAATGCTCATTTAGGTGGCGTTTATGGCTTGGCTTTTATTGATCAGCATAGAATTGTCAGTTCAGGTGAAGATGCCTGTGTTCGTGTTTGGAGTTTAGCTTCAGAATAACTACTACCTCTAAATGCATTATGCAGTTTTGTGGTATGAAACTGTTATATAGTTCTGCTGTCTTATGCGAGTATGTCAAGTCCTCTGCACTGGTTATATAATTGGAAGGAAAGTAGAGAAATTTTGAAGTGTTTTCTCTAAAGACTGGAACTTGTTATCCAGCATGGATTTAGATCTGAAGGGTATTTTTGAAGGAAACTCCCTAGTTATTTCTACACCAGTTGGTGATTGCTTGTCTTTGTCAAAGCAAAA 2088 0.4435 MAEFSLSETYACSPSTERGRGILISGDPRSNNILYCTGRSVMIRNLGNPLQVSVYGEHAYPVTVARYSPNGEWIASADVSGTVRIWGTHNDFVLKHEFRVLSGRIDDLQWSFDCLRIVACGDGKGKSFVRAFAWDTGTTVGDFDGHSRRVLSCAFKPTRPFRIVTCGEDFVVNFYDGPPFKFNMCIREHSNFVNCVRYSPDGSKFITVSSDRKGIIYEGKTGQKLGELASEDGHKGTIYAASWSPDSKQVLTVSADKTAKVWDILEDGSGKVNKTLAHTETGGVEDMLVGCLWQNDHLVVVSLGGMINLYSAKDLDQSPLSFSGHMKNITALTLVNRSDKLLLSCSYDGLIMKWIPGVGYSGKLDSKPIGQIKLLIAGEEEIVTSGFDNKVWRAPLHGDNLGSAEHADVGSQPKDLSIARSSPELALVAIESGLVLLNGLKVISTINLDFTVTACAIAPDGNEAIVGGQDGKLHIYSVSGDTFTEETVLEKHRGAINVIRYSPDVSMFASADLNREAVVWDRASKEVKLNNMLFHTARINCLDWSPDSTLVATGSLDTCVIIYEIGKPASSRITIKNAHLGGVYGLAFIDQHRIVSSGEDACVRVWSLASE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01304 611 Gene3D - 9 607 IPR015943 GO:0005515
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 231 264 - -
Bach10g01304 611 SUPERFAMILY WD40 repeat-like 27 354 IPR036322 GO:0005515
Bach10g01304 611 ProSitePatterns Trp-Asp (WD) repeats signature. 250 264 IPR019775 -
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 186 227 IPR001680 GO:0005515
Bach10g01304 611 Pfam WD domain, G-beta repeat 187 212 IPR001680 GO:0005515
Bach10g01304 611 Pfam WD domain, G-beta repeat 535 563 IPR001680 GO:0005515
Bach10g01304 611 Pfam WD domain, G-beta repeat 232 263 IPR001680 GO:0005515
Bach10g01304 611 Pfam WD domain, G-beta repeat 321 354 IPR001680 GO:0005515
Bach10g01304 611 Pfam WD domain, G-beta repeat 53 86 IPR001680 GO:0005515
Bach10g01304 611 CDD WD40 58 354 - -
Bach10g01304 611 FunFam Actin-interacting protein 1 13 339 - -
Bach10g01304 611 Gene3D - 13 337 IPR015943 GO:0005515
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 231 264 IPR001680 GO:0005515
Bach10g01304 611 SUPERFAMILY WD40 repeat-like 295 608 IPR036322 GO:0005515
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 55 86 IPR001680 GO:0005515
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 489 530 IPR001680 GO:0005515
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 55 86 - -
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 576 611 IPR001680 GO:0005515
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 489 521 - -
Bach10g01304 611 PANTHER WD-REPEATCONTAINING PROTEIN WDR1 1 608 - -
Bach10g01304 611 SMART WD40_4 315 355 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 439 477 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 269 311 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 179 218 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 136 176 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 568 607 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 91 135 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 482 521 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 48 87 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 526 564 IPR001680 GO:0005515
Bach10g01304 611 SMART WD40_4 221 263 IPR001680 GO:0005515
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 532 565 IPR001680 GO:0005515
Bach10g01304 611 FunFam Actin-interacting protein 1 340 608 - -
Bach10g01304 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 576 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01304 Bach-Chr10 10630995 10635764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01304 184 510 Eukaryotic Initiation Factors Gene Family AT2G46290 23.919 5.29e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01304 K24736 - gmx:100798693 1041.18