Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01285 ATTTTTGAAGGAGAACAGCTTTTAAGCTCACAGATATCCTTGGAATACAGTGAACTTTGTCTCTAAGGCGTAATAGATTTGAGGATGGGAGATCACTTAGTATTACTGGTTGATCGATTGCTTACTGAATCCACTTTAGAAGCTGCACTAGAGAGCAGAAATTGTTCGATGCAGGCAGCATCCTCAGCTATGAAGGACACAGAAGTCGATGTCACTTTGATGAAGATGAGTCTGGAAGATATGAAATCTCCTGGGAAATTGCTGTTATGTAGGATCTGCCATGATGAAGATGAAGATACCAATATGGAAACTCCCTGCTCTTGCGGTGGTAGTTTGAAGTATGCTCACCGAAGATGTGTACAACAGTGGTGTAATGAGAAGGGTGACACCATCTGCGAGATATGCCTACAGCCATACAAGCCTGGTTATACAGCTCCTCGTCCTCTATTTCAATTTGGACGTATTCCAATGAGTTTCAGGGGGAATTGGGAGATTTCAAGAAGAGACTTGAATAGTGCTCATTTGGTTACTATGGTTTCAAGTGACCAGAATATTATCAACTCTAACTATGATCAGTACTCAGCTTCTACGACAGGAAGTTTGATATGCTGTCGTTCAATTGCAGTCATTTTCATGGTATTGCTAATTTTGAGACACGTGCTTCCCCTAATATTTAGTACCAACAGGGAGTATTCCTTATCAATTTTGACGTTGTTACTTTTTCGAACTGCTGGGATTGTTGTGCCAGTGTACTTTATGGTGAGAGCAGTGACATCCATCCAGAGGCTTCGGAGACAACAACGGGAGCTGCCTAATGCCGTGGTAAATTCATCTGACGATGAAAATGAGCCATCAGATTTGCAGCTTCAACCTCATGTTGCTCGTGTACAGTAA 894 0.4195 MGDHLVLLVDRLLTESTLEAALESRNCSMQAASSAMKDTEVDVTLMKMSLEDMKSPGKLLLCRICHDEDEDTNMETPCSCGGSLKYAHRRCVQQWCNEKGDTICEICLQPYKPGYTAPRPLFQFGRIPMSFRGNWEISRRDLNSAHLVTMVSSDQNIINSNYDQYSASTTGSLICCRSIAVIFMVLLILRHVLPLIFSTNREYSLSILTLLLFRTAGIVVPVYFMVRAVTSIQRLRRQQRELPNAVVNSSDDENEPSDLQLQPHVARVQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01285 269 SMART ringv_2 61 108 IPR011016 GO:0008270
Bach10g01285 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 117 IPR013083 -
Bach10g01285 269 FunFam Zinc finger family protein 50 117 - -
Bach10g01285 269 CDD RING_CH-C4HC3_MARCH 62 107 - -
Bach10g01285 269 Pfam Protein of unknown function (DUF3675) 113 229 IPR022143 -
Bach10g01285 269 ProSiteProfiles Zinc finger RING-CH-type profile. 54 114 IPR011016 GO:0008270
Bach10g01285 269 SUPERFAMILY RING/U-box 60 112 - -
Bach10g01285 269 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 239 IPR033275 -
Bach10g01285 269 Pfam RING-variant domain 62 107 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01285 Bach-Chr10 10294635 10297207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01285 62 107 C3H Transcription Factor Family AT5G05830 40.385 5.76e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01285 - - gmx:100792304 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01285 10 10294635 10297207 Bach10g01285 10 10294635 10297207 ECH