Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01267 ATGACAAAGTCCCCAGAAGAACAACACCCTGTTAAGGCATTTGGATGGGCTGCTAAGGACCCTTCTGGGCATCTGTCCCCCTTCAACTTCTCCAGAAGGGCAACGGGAGACTATGACGTGAGGTTCAAAGTGTTATATTGTGGTATATGCCACTCTGATATTCATTTGGCCAAAAACGATTGGGGCTTCTCTGCCTATCCTTTGGTTCCTGGGCATGAGATAGTGGGTGAGGTGACAGAAGTGGGAAACCAAGTGGAAAAGGTGAAGGTAGGAGATAAAGTTGGAGTGGGGTGCTTGGTTGGTGCATGTCATTCCTGCCATAGCTGCAATGATGACCTTGAGAATTACTGCCCAAAGAGGATCTTCACTTACTGTTCCAAAGACTTTGATGGAACAGTAACATATGGAGGCTACTCTGACCACATGGTTGCCAATGAGCGTTATATTGTTACTTTTCCAGAAAGCTTGCCGCTTGCTGCTGCTGCTCCTCTTCTTTGTGCAGGGATCACAGTGTACAGTCCCTTGAAATATTTTGGACTTGGTGAGCCTGGGAAGCATCTGGGTATTGTAGGCCTTGGGGGCCTTGGTCATGTGGCTGTCAAATTTGCTAAGGCTCTTGGAGCAGAAGTGACTGTGATTAGTACATCGCCAAGCAAGAAAGAGGAAGCTCTGAACCATCTTGGTGCTGATTCATTTTTAGTTAGCCGGGACCAAGACCAAATGCAGGCTGCCATGAGAACAATGGATGGCATTATCGACACAGTGTCTGCTGTGCACCCCATTTTGCCATTGATGGGTCTTCTCAAGACCCATGGAAAACTTGTGATGGTGGGTGCACCAGTGACGCCACTTGAGCTACCTGTTTTTCCTCTAGTAATGGGAAGGAAGATAGTGGCAGGAAGTTGCATAGGAGGGATGAAGGAGACACAGGAAATGATTAACTTTGCTGCAAAACACAACATAGTTGCAGACATTGAAGTGATTCCAATGGATTATGTCAACACTGCCATGGATCGTCTTGCCAATGCTGATGTTAGGTATCGCTTTGTTATTGATATTGGAAACACTTTGGTCAATGCTACTGCTGCCACCCCTTGA 1098 0.4672 MTKSPEEQHPVKAFGWAAKDPSGHLSPFNFSRRATGDYDVRFKVLYCGICHSDIHLAKNDWGFSAYPLVPGHEIVGEVTEVGNQVEKVKVGDKVGVGCLVGACHSCHSCNDDLENYCPKRIFTYCSKDFDGTVTYGGYSDHMVANERYIVTFPESLPLAAAAPLLCAGITVYSPLKYFGLGEPGKHLGIVGLGGLGHVAVKFAKALGAEVTVISTSPSKKEEALNHLGADSFLVSRDQDQMQAAMRTMDGIIDTVSAVHPILPLMGLLKTHGKLVMVGAPVTPLELPVFPLVMGRKIVAGSCIGGMKETQEMINFAAKHNIVADIEVIPMDYVNTAMDRLANADVRYRFVIDIGNTLVNATAATP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01267 365 Gene3D - 167 323 - -
Bach10g01267 365 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Bach10g01267 365 CDD CAD1 14 352 IPR047109 GO:0016616
Bach10g01267 365 SUPERFAMILY GroES-like 20 185 IPR011032 -
Bach10g01267 365 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Bach10g01267 365 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Bach10g01267 365 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Bach10g01267 365 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Bach10g01267 365 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Bach10g01267 365 Gene3D - 16 353 - -
Bach10g01267 365 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0016616
Bach10g01267 365 FunFam probable cinnamyl alcohol dehydrogenase 16 173 - -
Bach10g01267 365 Pfam Alcohol dehydrogenase GroES-like domain 39 150 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01267 Bach-Chr10 9989775 9992031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01267 12 357 Monolignol Biosynthesis Gene Families AT4G37990 70.231 1.45e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01267 K23232 - pop:7465262 575.474