Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01192 ATGGATGGAGGTAGTTGCTTAGATGAAAGTACCACAACTGACTCTGTTTCGGCATCCCTCTCTCCGGTGACCACTCTAACTTCGCCGTTCTCGCCGACCCAGAAGAAGCTGTCTCCGCCACCGAATAGTCTATACCGTGTCGGCAGCGGTACCAGCACCATCGTGGACTCGGACAGCGGTGCCGAGGCCGAGTCCCGGAAGCTGCCGTCGTCGAAATACAAAGGCGTAGTGCCCCAACCCAATGGCCGCTGGGGTTCCCAGATTTACGAGAAGCACCAGCGTGTGTGGTTGGGCACGTTCAACGAGGAAGACGAAGCCGCTAGAGCGTACGACATCGCTGCCCATAGATTCCGTGGGAAAGACGCTGTCACGAACTTCAAGCCTCTCGCCGCCGGCGACGACCTTGAAACGGCGTTCCTGAACGCGCATTCCAAGGCCGAGATCGTCGACATGCTCAGAAAACACACGTACAACGACGAGCTTGAACAGAGCAAGAAGAACTACGGAATATTAGACAGTAACGGAAAGAGAATCAAAAGCGAAGGGGTCATTAACGGATCCGGTTTATTATCTGGATCGGGGATGAGTACGGATCGGGTCCAGAAAGCGCGTGAACAGCTTTTCGAGAAAGTGGTTACCCCGAGCGATGTGGGGAAGTTGAACCGATTAGTAATACCAAAGCAGCACGCGGAGAAGCACTTCCCTTTACAGAGTGGAAGCGCTTCTGCTGCTTGCGCAACAAAAGGGGTGCTTTTGAATTTTGAGGACGTTGGAGCGAAAGTGTGGCGATTTCGATACTCGTATTGGAACAGTAGCCAGAGCTACGTGCTCACCAAAGGGTGGAGCCGGTTCGTGAAGGAGAAGAACCTCAAAGCCGGCGACACGGTTAACTTCTACAGGTCGACCGGACCGGACAAGCAGCTCTATATTGATTGGAAACCAAGGCAGCATGATTGTAGTAATAACAGCAACGCCAACAACTTCCTGAACCCGGTCGGGCCGGGGGTTCAACCGGTTCCGATAGTCAGATTATTTGGGGTCAACATTTTGAACATACCTGCTTCTGCTGCTCTGGAAGCTGTTGCCGGAAGCTGCAATGGGATCAAGAGGAAAGAATTGGAGCTGTTTACGTTCGAGTGTAGTAAGAAGCCAAAGATAATTGGGGCTTCGTAA 1173 0.526 MDGGSCLDESTTTDSVSASLSPVTTLTSPFSPTQKKLSPPPNSLYRVGSGTSTIVDSDSGAEAESRKLPSSKYKGVVPQPNGRWGSQIYEKHQRVWLGTFNEEDEAARAYDIAAHRFRGKDAVTNFKPLAAGDDLETAFLNAHSKAEIVDMLRKHTYNDELEQSKKNYGILDSNGKRIKSEGVINGSGLLSGSGMSTDRVQKAREQLFEKVVTPSDVGKLNRLVIPKQHAEKHFPLQSGSASAACATKGVLLNFEDVGAKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVNFYRSTGPDKQLYIDWKPRQHDCSNNSNANNFLNPVGPGVQPVPIVRLFGVNILNIPASAALEAVAGSCNGIKRKELELFTFECSKKPKIIGAS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01192 390 Gene3D AP2/ERF domain 71 128 IPR036955 GO:0003700|GO:0006355
Bach10g01192 390 MobiDBLite consensus disorder prediction 1 59 - -
Bach10g01192 390 ProSiteProfiles B3 DNA-binding domain profile. 208 316 IPR003340 GO:0003677
Bach10g01192 390 Pfam AP2 domain 71 119 IPR001471 GO:0003700|GO:0006355
Bach10g01192 390 FunFam AP2 domain-containing protein RAP2.8 71 128 - -
Bach10g01192 390 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 67 357 IPR044800 GO:0003700
Bach10g01192 390 CDD AP2 71 126 IPR001471 GO:0003700|GO:0006355
Bach10g01192 390 ProSiteProfiles AP2/ERF domain profile. 72 127 IPR001471 GO:0003700|GO:0006355
Bach10g01192 390 SMART rav1_2 72 133 IPR001471 GO:0003700|GO:0006355
Bach10g01192 390 MobiDBLite consensus disorder prediction 1 77 - -
Bach10g01192 390 SMART B3_2 208 316 IPR003340 GO:0003677
Bach10g01192 390 SUPERFAMILY DNA-binding pseudobarrel domain 206 312 IPR015300 -
Bach10g01192 390 CDD B3_DNA 207 301 IPR003340 GO:0003677
Bach10g01192 390 Gene3D - 196 327 IPR015300 -
Bach10g01192 390 SUPERFAMILY DNA-binding domain 71 127 IPR016177 GO:0003677
Bach10g01192 390 Pfam B3 DNA binding domain 208 313 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01192 Bach-Chr10 9084279 9085451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01192 5 387 B3 DNA Binding Superfamily AT1G25560 60.870 7.01e-148 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Bach10g01192 B3 2.1e-27 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01192 K09287 - qsa:O6P43_025676 528.865