Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01187 GTTTTGGTGCTTGTCTGTACTTTCTCTCTGCAATTCGTTTCTCGGAATGCTTGTTCGGAGGAGGCCTATGAGTTGGAGGAGGGTGGCGAAGTCTCTTCAGGCTTTGTTGGGTCATGGCTTGCTTTTCTCATTCACGCTTCTGCTGGTTCTCAAGGTTGATCGTTTTGCCCGTTACTCATGGTGGATTGTTTTTTCACCTTTATGGCTTTTTCATGCTGTTATGGCACGAGGCAGGTTTTCTTTGCCGGCTCCTTCAATGCCTTACGACCGCCATTGGGCTCCTTGTCATGCCATCATGGCAACACCATTACTTATTGCTTTTGAGCTTCTTATTTGCATACATCTTGGCAGCAGCTATGTGGTTAATTTGAAGATTGTATTCCTACCCCTCTTGGCTATTGAAGTGGCAATTTTGGTTGATAATATCAGAATGTGTAGAACTTTGATGCCTGGAGATGATGAAACTATGACTGACGAGGCAGTATGGGAAACCCTTCCTCACTTCTGGGTTGCAATATCCATGGTCTTCCTTATTGCAGCTACGCTATTCACTCTTCTAAAGATATGTGGTGATGTTGCTGCTCTAGGTTGGTGGGACTTGTTTATTAACTATGGCATTGCGGAGTGCTTTGCCTTTCTTGTTTGTACAAAGTGGCACAATCCAAAAATTCATGGAAATTATAACATAATGGAACCCCATTCTTCATCATTTAGTATAAGGTACCTGGACTGGGATAGAGGATTCGTAGCTTCCTCAGATGATGATAGGCAAGAAAGTGTATTTTGCAGCTTGCAGGACATTGGTGGGCATATTATGAAGATTCCTTTCATTGCTTTCCAAATAATGTTGTTTATGCGCTTAGAGGGAACGCCGCCTGGTGCCAGAAATGTACCAGTATGGGTTATTTTTTCTCCCCTTCTTTTGCTGCAAGGAGCTGGGGTTTTATTTGCAGCGTATAGATTGGCGGAAAAAGTAGTTATTTTACTTCATAGTGGAGCTGTTTCTCAGAGTTATTCAGCTATAGCATCCAAAACCCGGGATTGCTTTGGGTTCTACCATCATGGATCGAGGTTGCTTGGTTGGTGGTCAATTGATGAAGGAAGTCGAGAGGAATGTGCTAGACTTTATTGTGCTGGGAGTTCCGGGTATAATACTTTCTCACCCTGTACCGTGAAGAAAATGCCTAAAGCGGATCTTGTCGATGAGATCTGGAGACTGCAAGCTGCACTGAGTGAGCAGACAGAAGTCACAAAATTTAGCCAGCACGAGTATGAAAGACTTCAAAATGAAAAGATCCTATGTAGAATTTGCTTTGAGGAGCAAATTAACGTGGTCTTGCTTCCATGTAGGCATCACATTCTTTGCAGTACTTGCGGCGGTAAATGTAAAAGGTGCCCCATTTGCCGCGTCACCATCGAAGAACATATGCCTATATATGATGTGTAG 1447 0.434 MLVRRRPMSWRRVAKSLQALLGHGLLFSFTLLLVLKVDRFARYSWWIVFSPLWLFHAVMARGRFSLPAPSMPYDRHWAPCHAIMATPLLIAFELLICIHLGSSYVVNLKIVFLPLLAIEVAILVDNIRMCRTLMPGDDETMTDEAVWETLPHFWVAISMVFLIAATLFTLLKICGDVAALGWWDLFINYGIAECFAFLVCTKWHNPKIHGNYNIMEPHSSSFSIRYLDWDRGFVASSDDDRQESVFCSLQDIGGHIMKIPFIAFQIMLFMRLEGTPPGARNVPVWVIFSPLLLLQGAGVLFAAYRLAEKVVILLHSGAVSQSYSAIASKTRDCFGFYHHGSRLLGWWSIDEGSREECARLYCAGSSGYNTFSPCTVKKMPKADLVDEIWRLQAALSEQTEVTKFSQHEYERLQNEKILCRICFEEQINVVLLPCRHHILCSTCGGKCKRCPICRVTIEEHMPIYDV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01187 466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 393 465 IPR013083 -
Bach10g01187 466 ProSiteProfiles Zinc finger RING-type profile. 419 454 IPR001841 -
Bach10g01187 466 SUPERFAMILY RING/U-box 409 463 - -
Bach10g01187 466 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 8 466 - -
Bach10g01187 466 Pfam Zinc finger, C3HC4 type (RING finger) 417 459 - -
Bach10g01187 466 Pfam Transmembrane Fragile-X-F protein 35 294 IPR019396 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01187 Bach-Chr10 9003523 9009306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01187 8 466 C3H Transcription Factor Family AT1G73950 64.026 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01187 - - qsa:O6P43_032794 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01187 10 9003523 9009306 Bach10g01187 10 9003523 9009306 ECH