Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01172 CCTTGCTCGGACTCTTCCTTCTTCTCTTCTCCTTTACTTGTTTGGTTTGCTAATTAAAGAGTTGTCTCTTTTTCACCCTCTTCTTGTTTGACAACAAATTCTTGGGCTTTGTTTGAAACGATGATGCCCCCAGAGCAAGAAACTACTGTTACCACCACTGTTACACCAAACATTCCGGTGACAAACCGGCTGGAGAACAGCTTGGTTCATGCTGAACCACCGGGTTCCACCTCCAGTGAAGCAAAACCCAGTTTGGATAATGGCATCCCCGTTCAACAACAGCCAACAGCAGCAAGGTTTTCCAATATTCTACAACAATCCAAGCCAGTTACCCTCAGATTTGAGGACGTGTGTTATAGTATAACGTTTCGAAGTAAGAAGAATGGCGATTGTTCTTGTTTATCTTCACAAGAGCCAAAGCTTAGCCGGAATATACTCAACAGCGTGACGGGAATTGTCCGGCCCGGCGAGTTGATGGCAATGCTGGGACCCTCCGGCAGCGGCAAGACCACTCTGCTCACGGCCCTGGCGGGCCGCCTTGCCGGAAAAGTGTCCGGTACTATAACATACAATGGCCAACCTTTCTCTAGCTCCATGAAGCGGAAGATTGGTTTTGTGCCACAAGATGATGTCTTGTATCCTCACCTCACTGTTCTTGAGACTCTTGCTTATGCTGCTTTTTTGAGACTACCCAAAACTCTCACTACCCGAGAGAAACTGGAGCAAGCTGAGATGATCATTCGTGAGCTGGGATTAACACGGTGCCAGAACAGTGCTGTTGGTGGCGGCGCGGCCTTGTTTCGGGGCATTTCCGGTGGTGAGCGCAAACGGGTCAGTATCGGGCAGGAGATGTTGGTCAACCCGAGTCTATTATTGCTGGATGAACCAACCTCCGGCCTGGACTCAACAACCGCACAACGCATCGTGTCAATGTTACGGGGGCTCACCCTTGGTGGCCGGACGGTGGTGACCACCATACATCAGCCTTCTAGCCGGTTGTACAGGATGTTTGATAAGGTGGTGGTGCTATCCGATGGGCACCCAATTTACAGTGGACAAACGGGTCGGGTCATGGAGTACCTCGGGTCCATTGGATATGTGCCCGCATTCAATTTCATGAACCCGGCAGATTTTCTACTTGACCTTGCTAATGGCATAGTAGCTGATGTTAAACAGATTGATCAGCCAGATTTACATAGCAGATCAGACCATCAAGAGGATCAAGCTTCAATCAAACAATCCCTTGTATCATCCTACAAAAAGAACTTATATCCTGCCCTGAAAGAAGAGATTCAGAGAAATAACAGGGATCCATCTGTTTATACATCAAGAACACCCAGAAGTTCAGAGAACCAATGGACCATAAGCTGGTGGGAACAATTCAAGGTTCTGTTGAAAAGGGGTTTACAGGAGAGGAGGCATGAATCTTATTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTTTCAATTCTCTCAGGACTTCTATGGTGGAACTCTGATCCTTCACACATACAAGATCAGGTAGGCCTTCTTTTCTTCTTCTCCATATTCTGGGGGTTTTTCCCTCTATGCAATGCCGTTTTTGCGTTTTCTCTGGATCGGCCAGTGCTGAAAAAAGAGAGGTCATCAGGCATGTACCACCTCTCCTCCTACTACATTGCCCGGACGGTTGGAGATTTACCAATGGAGCTAGTCCTTCCTACGATCTTTGTAACAATCACTTACTGGATGGGCGGCCTCAAGCCTTCACTAGTCTCATTTTCCTTAACCCTCATGATCATCCTTTTTAATGTACTTATCTCCCAAGGAATAGGCCTAGCACTTGGTGCCATCCTAATGGATGTGAAGCAGGCCACAACTCTAGCTTCAGTAACCATTATGGTTTTTCTCTTAGCTGGTGGTTACTACATTCAGCAAATGCCAGCATTTATGGCTTGGTTGAAGTACATTTCTTTCATCCACTACTGCTATAAGCTTCTGGTTGGAGTGCAGTATTCAGTAAATGAGGTTTATGACTGTGGATTAGGGTTACATTGTAGGGTAATGGATTTTCCAGCTTTGAAGTATCTGGGGTTAAGTAATTTGTGGGGTGATGTAGCTGCATTGACTACAATGTTAATAGGATGCAGAATTGTGGCCTATGTAGCTTTAAGGATGGGTCAGCCTCACTGA 2172 0.4645 MMPPEQETTVTTTVTPNIPVTNRLENSLVHAEPPGSTSSEAKPSLDNGIPVQQQPTAARFSNILQQSKPVTLRFEDVCYSITFRSKKNGDCSCLSSQEPKLSRNILNSVTGIVRPGELMAMLGPSGSGKTTLLTALAGRLAGKVSGTITYNGQPFSSSMKRKIGFVPQDDVLYPHLTVLETLAYAAFLRLPKTLTTREKLEQAEMIIRELGLTRCQNSAVGGGAALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVSMLRGLTLGGRTVVTTIHQPSSRLYRMFDKVVVLSDGHPIYSGQTGRVMEYLGSIGYVPAFNFMNPADFLLDLANGIVADVKQIDQPDLHSRSDHQEDQASIKQSLVSSYKKNLYPALKEEIQRNNRDPSVYTSRTPRSSENQWTISWWEQFKVLLKRGLQERRHESYSGLRIFQVLSVSILSGLLWWNSDPSHIQDQVGLLFFFSIFWGFFPLCNAVFAFSLDRPVLKKERSSGMYHLSSYYIARTVGDLPMELVLPTIFVTITYWMGGLKPSLVSFSLTLMIILFNVLISQGIGLALGAILMDVKQATTLASVTIMVFLLAGGYYIQQMPAFMAWLKYISFIHYCYKLLVGVQYSVNEVYDCGLGLHCRVMDFPALKYLGLSNLWGDVAALTTMLIGCRIVAYVALRMGQPH 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01172 683 SMART AAA_5 115 307 IPR003593 GO:0016887
Bach10g01172 683 FunFam ABC transporter G family member 22 93 324 - -
Bach10g01172 683 Pfam ABC-2 type transporter 419 625 IPR013525 GO:0016020|GO:0140359
Bach10g01172 683 ProSitePatterns ABC transporters family signature. 230 244 IPR017871 GO:0005524|GO:0016887
Bach10g01172 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 673 - -
Bach10g01172 683 MobiDBLite consensus disorder prediction 1 24 - -
Bach10g01172 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 324 IPR027417 -
Bach10g01172 683 Pfam ABC transporter 106 258 IPR003439 GO:0005524
Bach10g01172 683 MobiDBLite consensus disorder prediction 31 50 - -
Bach10g01172 683 CDD ABCG_EPDR 69 312 - -
Bach10g01172 683 MobiDBLite consensus disorder prediction 1 50 - -
Bach10g01172 683 Gene3D - 94 324 IPR027417 -
Bach10g01172 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 330 IPR003439 GO:0005524
Bach10g01172 683 Pfam ABC-2 type transporter 287 351 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01172 Bach-Chr10 8865756 8869609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01172 114 319 Calmodulin-binding Proteins AT2G36910 26.415 1.56e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01172 K05681 - gmx:100792991 1013.83