Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01162 ATGAGTATTATATCAGCACTTAATAATACCCTGTTCTCTATCCAATTCTACAGCATGGTTATGAAGTACCTAGCTCTAGTTTTGGCCCAGTTGAAATGGGCATTGGATTTCCTCCTCTTACACCCTTTCTACAAGCTTTGTAAATCTGACATGCCAGTAATTGGAGGAGAAGTGAAGATTTGCTGCTATGAGCCAAATCCCAGCTCTGATGAAGAAGTGGACTGTGCTGTGTGCCTCTGCAAGATTAGAGAAGGTGAAGAGATCAGAGTGTTGAGGTGTGAACATCTCTTCCACAGAATTTGTTTGGATAGATGGGTTGGTTTCAATCTCAGTTATGCTACTTGCCCTCTCTGCAGAGACATTCTGGGTCTGTGCAAGGTAATTACTGAGCTTGGAGCTGAGTTGATACAATTTCAATTTTGGTATATCAATTCTAGAGACCGTGAGAGATGGTGGCTACGCTGA 465 0.4237 MSIISALNNTLFSIQFYSMVMKYLALVLAQLKWALDFLLLHPFYKLCKSDMPVIGGEVKICCYEPNPSSDEEVDCAVCLCKIREGEEIRVLRCEHLFHRICLDRWVGFNLSYATCPLCRDILGLCKVITELGAELIQFQFWYINSRDRERWWLR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01162 154 Pfam Ring finger domain 74 119 IPR001841 -
Bach10g01162 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 122 IPR013083 -
Bach10g01162 154 ProSiteProfiles Zinc finger RING-type profile. 75 119 IPR001841 -
Bach10g01162 154 SUPERFAMILY RING/U-box 69 125 - -
Bach10g01162 154 SMART ring_2 75 118 IPR001841 -
Bach10g01162 154 PANTHER - 15 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01162 Bach-Chr10 8766942 8767406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01162 74 122 C3H Transcription Factor Family AT1G15100 56.000 2.15e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01162 K16282 - qsa:O6P43_032823 156.377