Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01144 TTTGAACAAAGGCTAAATTCAATAAAGTTTTTGAGGAAAAAGGATTGAATGGAAGGCAGAGTATCAAAAGTAACACAGAATCAAAAATGGGTATCTTTCTCTTCCCACTTTTAGTCTGATTTTGCTTTCTCTCTCTTCCACAGTTGGGTTCTGCAACTCTGACTAGGGTTTGAATGGGGGTATTTATCATGCTGAAATCAATGTTCTTTGCATAATTGACTGAGTCCATAGACTTTTTTCAGCTCTTCTTTGAACAGTACTTTTTAGCTTCTCTCTCATTCAAGAGGCTTCTTTATGAAATTTGGTACTTCAAGTTCAGTGGTAGCTTTGGAAATGGCAGCTGCCAAACTCGTGTGAGCTTTAGTACATCTTTTGGGTACTTGGTTTTGTTTCGGCTATTTTGCAGTTTATCAGTTTCATTAAGTGAAGTTGGTCTTTCTGCTTTAACTTCCAAGCTTCTTTTCCTTGTGAAAAATTGCTTCAAATACTTCCAACTTTCTCTTCTCTTTTGGGTGGATTTAGAGATGGGCGGATATTTTGGGATTTGTCTAGAGTTTCTTGCTTCGCCAGTTTCAAAAATACCAGAATTTGGGTTGAAGCTTGTTATAAAGCTCTCTTCATTTTAATGATTGAATGTTTGTTCATTTGTCTGAATATAACTTCATCTTTGCCCCCTCCTTTTGATCATTGTTTGTTGCTGGGAAACCTTCAATTTTGATACTGTTCGAGGTTTTTTTTCCCTCAGATTTCATCTGATTTTGTTGTTAATTATTCTGAAGAGATCATAGAAAAGTGTCTTGTAGTGGCTGCTTTAATACTCAAGAGAGTTTGGATATGGGTGACAAAGAAAAACTCGAGCTTGATAGAAACGGGGATCCTATGAATTATTCAACTGGTATGCCTTCTGATTGGCGATTTGGGGGTGCTAACCTTGCAAATGCTTCTGTGGGTGTGGTTCCCATGGGAAATTCAGTGGCTGTTAGCAGAGGGGATCTAATTGGTTCTTCTTCATGTTCCTCTGTTTCCATGGTGGACTCACTTGGTCCAACCTTCTGGGACCATCCCTCCAATGCTCAAAACTTGGGATTTTGTGAAATTAGTGTGCAGAATAATGATAGCTCTTCAAACCCAATTGGTATCAGGAAAGATGGTCTTGTCCTTTCAAGAGCTGGTGTTGATAGAACACTTGAAATGGGCTGGAACCCAGCACATTCTATGTTGAAGGGGGATGTCTTTTTACCGAATGGGCCAGGAATCTTTCCACAGAGTTTATCTCAGTTTCCAACTGATTCTGCATTTATTGAGCGTGCTGCAAGATTCTCAGGCTTTAGTGGAGGGAATTTTGGTGATATGGTGAACTCATTTGGGATTCCCCAGTCCATGGGTCTATATGTTAGGAGTGGGGGTACAATGGATGGAGCACGAGATGTTCTTGCAGGCCATGGATTAAAATCACCATCTGGAGGACAATCTCAAGGAAGTGATCTAAATGTAGGTGAAGCTGCCAAAGATGTGTCTCCAACTGTTGAGCGTCTGGCTACTGAAGGAAGCCCACTCAAGAATGAAAAAAGAAGTGAAAGCTGTGTATTATCTCAAGATGAAGCAAAACATACTAGAGGTAGGTCTAATAATGAGTCTGATGGAGCTGAGTCTAGTGGTGATGATGGTGCTGCTGGTCAAGATGATTCCCGGATGGTGGAGGGTACAAGTGGAGAACCTTCTATGACAGGACTGAACTCAAAGAAAAGGAAAAGAAATGGGCAGGATGCTGATAACGATAAAGCAAAAGGTGCTCATGAATTACCAAGTGAAGCTGCAAAGGACAATTCTGAGGATCGACAGAAGGGAGACGAACAACCAACTTCAACAACCAAGGCTACTGGGAAGAATGCTAAACAGGGTTCTCAAGCTTCTGATCCTTTAAAAGAGGAATACATACATATTAGGGCTCGCCGTGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGAGTAAGGAGGGAAAAAATCAGTGAAAGGATGAAATTTCTTCAAGACCTTGTACCTGGGTGCAATAAGGTCACTGGCAAGGCAGTGATGCTAGACGAAATCATTAACTATGTACAGTCACTTCAACGGCAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCACGGCTGGATTTTAATATAGAAGGACTTCTTGCTAAAGATATTCTTCAGCAACGGCCTGGCCCTTCATCTGCGCTGGGTTTTTCTCCAGATATGTCTACGGCATTTCCTCCATTACATCCATCTCAACCAGGACTTATTCAGTCGACTCTTTCTGGCATGTCAAACCCATCTGATATACTTCGGAGAACCATACATCCACAATTGGCGCCTTTCACCGGAGGATTCAAGGAGCCTAATCAGCTACCTGATGTCTGGGAGGATGAGCTTCACAATGTTGTGCAGATGAGCTATGCAACAATTGCTCCCATGAGTAGCCAAGACGTGGATGATTCTGCGCCAACAGGTCAGATGAAAATTAAACTTTGA 2526 0.4153 MGDKEKLELDRNGDPMNYSTGMPSDWRFGGANLANASVGVVPMGNSVAVSRGDLIGSSSCSSVSMVDSLGPTFWDHPSNAQNLGFCEISVQNNDSSSNPIGIRKDGLVLSRAGVDRTLEMGWNPAHSMLKGDVFLPNGPGIFPQSLSQFPTDSAFIERAARFSGFSGGNFGDMVNSFGIPQSMGLYVRSGGTMDGARDVLAGHGLKSPSGGQSQGSDLNVGEAAKDVSPTVERLATEGSPLKNEKRSESCVLSQDEAKHTRGRSNNESDGAESSGDDGAAGQDDSRMVEGTSGEPSMTGLNSKKRKRNGQDADNDKAKGAHELPSEAAKDNSEDRQKGDEQPTSTTKATGKNAKQGSQASDPLKEEYIHIRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPGPSSALGFSPDMSTAFPPLHPSQPGLIQSTLSGMSNPSDILRRTIHPQLAPFTGGFKEPNQLPDVWEDELHNVVQMSYATIAPMSSQDVDDSAPTGQMKIKL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01144 563 MobiDBLite consensus disorder prediction 342 359 - -
Bach10g01144 563 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 376 426 IPR011598 GO:0046983
Bach10g01144 563 SMART finulus 382 432 IPR011598 GO:0046983
Bach10g01144 563 MobiDBLite consensus disorder prediction 198 363 - -
Bach10g01144 563 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 254 478 IPR024097 GO:0006355
Bach10g01144 563 Pfam Helix-loop-helix DNA-binding domain 379 427 IPR011598 GO:0046983
Bach10g01144 563 MobiDBLite consensus disorder prediction 300 341 - -
Bach10g01144 563 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 374 445 IPR036638 GO:0046983
Bach10g01144 563 FunFam Basic helix-loop-helix transcription factor 373 445 - -
Bach10g01144 563 Gene3D - 373 446 IPR036638 GO:0046983
Bach10g01144 563 MobiDBLite consensus disorder prediction 238 266 - -
Bach10g01144 563 CDD bHLH_AtBPE_like 366 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01144 Bach-Chr10 8538987 8542569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01144 14 539 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 47.655 1.74e-134 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach10g01144 HLH 5.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01144 - - gmx:100797720 805.823