Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01125 ATGGAATCTTGGAGTTACACCCCTGAAGAGAAAAGCTATTTGTTTTCTGAGGAAATGGACTTTTCACTTGATGCTTTTATGAGAACTAGAAAAGCGCTGGTTGAATGGGACAATAAGGCCTCCTGTAACCTTGAAAGGGATGGATTTATTTCAGATAGAGAAGCAGTTAAAAGCATGGAATTCGTGGACTTGGGATTTCCAGATCTGTTCCGAAAATCTTTTCATGGTAGCCAGCTACTGGAAACATCTAGTTGTGACCTAGATAGTAATTCTAGTAAAAGAGTGAATTCCTCTACTCATGTTGTTGCTTTGGATTCATCTTTGGGGGAAGAAGAATTTGAGTCAAAGCATTCCAGTCCTCTAGTTGAATCTAAAACTCATGATTCGTCACTCATTGACTTGAAGCTAGGAAGATTAGCAGATTGTAAAGATGCAAGTGGTAATGAAATTGCAAAAGAAGGGCTAGCTTTATCCTCTATACCTCCAAGGGCACTTGCAAAGAGAGCTCGCACTTCTAGCTCGCCTACTCAAAAACCTGTATGTCAAGTTTATGGTTGCAATATGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCATAAAGTTTGTGATGTTCACTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAACAGAGGTTTTGTCAGCAGTGTAGCAGGTTCCATTTGCTAGCTGAGTTCGATGATGGGAAGCGTAGTTGTCGCCGACGCCTGGCTGGGCATAATGAACGTAGAAGGAAACCTCAGTTTGATTACATCTCTGGTAAACCGCATAAGATGCTTCAATCATATCAAGGTGCCAAATATCTTGGGGCTTCATTGCAGAAGAGACCCCAGTTTGCATTTCAAGATATATTTCGAAGTGGCATTTTTTACCCAGAGAAGTATGGACAAACCAATCATAGTGAAGATATCAAAGTGGAAGAAGAACCATTTTACAGTCCTCAACTAGCAGTATCAATCACACACGGTCAAGAGTTATCCAACTCCAGCTGTGCTCTCTCTCTTCTGTCAGCTCAAGCTCAAGACCTGTCGCGCTCCTCGGTTGGAAATCCAATTGCTACTTCCCTAATTTTTCAGGGCATGTGCTCCAGCCGCAGTGATAGCCAAGTTTCTGAAATGCCTCTGGGAATAAGATCAGTGGATAAATATGTACAAAATGGGTCCTATTCATGTGGGGAAAATTCTATGGATGTTAAAAATGGAGCTGGAGTGCTTTCTGAGGCTGGTCATTCTCAAGTCCAAGTCCATAGAGATGATATTTCTCAATCATCATACTCATCAAATGACAAATACCATTTTACCCCTGAACATGGAACCACTGTTGATTTGTTCCAATTGTCCTCACATCTTCAAAGGGTGGAGCAACAAAGAAATTCTTTCTCAGTAAAGCGGCAAAATGAGGACTGGTGTTTCCCAACTGTGTAG 1449 0.4141 MESWSYTPEEKSYLFSEEMDFSLDAFMRTRKALVEWDNKASCNLERDGFISDREAVKSMEFVDLGFPDLFRKSFHGSQLLETSSCDLDSNSSKRVNSSTHVVALDSSLGEEEFESKHSSPLVESKTHDSSLIDLKLGRLADCKDASGNEIAKEGLALSSIPPRALAKRARTSSSPTQKPVCQVYGCNMDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYISGKPHKMLQSYQGAKYLGASLQKRPQFAFQDIFRSGIFYPEKYGQTNHSEDIKVEEEPFYSPQLAVSITHGQELSNSSCALSLLSAQAQDLSRSSVGNPIATSLIFQGMCSSRSDSQVSEMPLGIRSVDKYVQNGSYSCGENSMDVKNGAGVLSEAGHSQVQVHRDDISQSSYSSNDKYHFTPEHGTTVDLFQLSSHLQRVEQQRNSFSVKRQNEDWCFPTV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01125 482 Gene3D - 171 242 IPR036893 GO:0003677|GO:0005634
Bach10g01125 482 FunFam Squamosa promoter-binding-like protein 14 172 242 - -
Bach10g01125 482 Pfam SBP domain 181 254 IPR004333 GO:0003677
Bach10g01125 482 ProSiteProfiles Zinc finger SBP-type profile. 178 255 IPR004333 GO:0003677
Bach10g01125 482 SUPERFAMILY SBT domain 179 260 IPR036893 GO:0003677|GO:0005634
Bach10g01125 482 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 120 264 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01125 Bach-Chr10 8341988 8345977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01125 132 480 SBP-box Gene Family AT1G69170 37.867 1.69e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach10g01125 SBP 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01125 - - gmx:100797372 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01125 10 8341988 8345977 Bach10g01125 10 8341988 8345977 ECH