Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01106 ATGCATGCATTTGGAAAGCTCAAGAAGAAGCATGAAGCTTCAAAGGTTTTTGAGCACTTCGTAAATCTGGGTGTTAAGCCTAATGCAACATCATACTCGGTGCTTGTGGATGCTCACCTCATAAACCGGGATGTTAAATCTGCACTGGCTGTGATTGACGATATGGTGTCTGCTGGTTATGAACCATCAAAAGAGATGCTAAAAAAGGTTAGAAGGCGATGCATACGTGAGATGGACTATGAGAATGATGACCGGGTGAATTCTCTGGCTAAATCGTATAGAATCCGAATGGGCTCAGAAGCTCGCCGGGATATGCTGTTTAATCTTGAGTACAGCACAGATTATGCTTGA 351 0.433 MHAFGKLKKKHEASKVFEHFVNLGVKPNATSYSVLVDAHLINRDVKSALAVIDDMVSAGYEPSKEMLKKVRRRCIREMDYENDDRVNSLAKSYRIRMGSEARRDMLFNLEYSTDYA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01106 116 Gene3D Tetratricopeptide repeat domain 1 97 IPR011990 GO:0005515
Bach10g01106 116 PANTHER OS07G0599000 PROTEIN 1 116 IPR044605 -
Bach10g01106 116 Pfam Pentatricopeptide repeat domain 15 63 IPR002885 -
Bach10g01106 116 NCBIfam pentatricopeptide repeat 31 63 IPR002885 -
Bach10g01106 116 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 28 62 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01106 Bach-Chr10 8214929 8215639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01106 1 91 EF-hand Containing Proteins AT1G02150 26.316 6.01e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01106 - - hbr:110650547 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01106 10 8214929 8215639 Bach10g01106 10 8214929 8215639 ECH