Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01098 ATGGAAGAGAGGAAGTTTGTGTGCAAGTATTGCAAGAAGAAATTTCCCTGTGGGAAGTCTCTGGGTGGTCATATCAGGACCCATATGAATGAACACCCAGCTCAGGATCAAGATCATAACGACGAAAAGCGTAATGTTGATAGGGTCAAGTGCGATGCTGCAAGGAAGAGGAAGAAAGATTTTGGGTCTGAAGCAGCAGCTGCTGCTGCTGATGCTGGGAACTACAATTATGGTCTCAGAGAGAATCCCAAGAAGACTACGAGATTTGTGCATTCCAAAACTTCTCCTTTGCATCAGGAGAAGTTCTGTAAAGAATGTGGCAAGGGTTTTCCATCATTGAAAGCTCTCTGCGGTCACATGGCTTGCCACTCGGAGAAGGAGAAAGGAAGCAATAAACTTGAGAGCAATTCTGGGTTCAGTGAGAAGCAGAAATTGGTAATGGATAGTCAATCTGATACCGAGACTTCTGCTCCGACCCATCAAAGGAGATCGAGGAGAACGAGGTTGAAGACACTCAACAATCATCCTTCTCCTGTTCCTTTGGGGAACGGTTCTTCGGCTGTGTCAGAGGTGGAGCAGGAACAAGAAGAGGTTGCAAGGTGCTTGATGTTATTATCCAAAGATTCTAGCCAGAGGGGTCGTTTTGCTTTGTTAACAGATTCTTCTGATAACAATTCAGTTGTTTTAGAGGCTAAGTCGCCGTCTGTTGATACTAGAATTACTGGCAATAATGGTAAGAACTCTGTCTCCAATGCTTATGAGCTTGTAGGGAAGAAGGTGCACAAAGATATGAAGTTAAAGACTGCTGAGATTGCTATTTCTGATAATTCAGATTCTGGGTATTTCAGATATGGCCCCAAAAAGGTTGGTTCAGATGTTTCAATTGAAGGGTTTTTCAAAAATCGTAACTTCAACAAGCTCAAAGTGGATTATGGGTCTGATTTTGAGCCTTACGGTGCTGAAACAAGGAAGATTCTGAACAAATGCAGAAACAGAAATAACAGTTCCAAGAAACTGGAGCTGGAGGATGTGAACTATAATGAAAGTGATGGAGCTAAGAGGAAGTTTGATTCAAAATATGGTTCTTTTAACCATAATTCAATTGGGGTTTCCTACAAGAAGACAGCAAATGGTTTCCTCAAAGATGAAATCTATGAGAGTGGTGGAACGGAATGGAGGTACGAGTGCTTGAGCAGCGAAAGGGTAAATGTCTCTTATGATTCAGCATATGAGAGTGATGAGAACAGCACAGACACTGATTCTTATCCTGCTGTGAAGCTCCAAGGCAGTAAGGTCCTCAATCAGAAGAAAACCAACATCACCAAGAAGAAATTGATGTCAAAGAAAAGCAGAGGACACGAATGCCCAGTTTGTCACAAGATTTTCAAGTCAGGCCAAGCATTAGGAGGTCACAAAAGGTCCCATTTTGTTGGTGGTTCTGAAGAAAACAGTCTAGTAATAAAACAAGGTCCAGCTGCTGTTCCATGTCTAATTGATCTCAACCTACCTGCTCCTGTTGATGAATAG 1527 0.4237 MEERKFVCKYCKKKFPCGKSLGGHIRTHMNEHPAQDQDHNDEKRNVDRVKCDAARKRKKDFGSEAAAAAADAGNYNYGLRENPKKTTRFVHSKTSPLHQEKFCKECGKGFPSLKALCGHMACHSEKEKGSNKLESNSGFSEKQKLVMDSQSDTETSAPTHQRRSRRTRLKTLNNHPSPVPLGNGSSAVSEVEQEQEEVARCLMLLSKDSSQRGRFALLTDSSDNNSVVLEAKSPSVDTRITGNNGKNSVSNAYELVGKKVHKDMKLKTAEIAISDNSDSGYFRYGPKKVGSDVSIEGFFKNRNFNKLKVDYGSDFEPYGAETRKILNKCRNRNNSSKKLELEDVNYNESDGAKRKFDSKYGSFNHNSIGVSYKKTANGFLKDEIYESGGTEWRYECLSSERVNVSYDSAYESDENSTDTDSYPAVKLQGSKVLNQKKTNITKKKLMSKKSRGHECPVCHKIFKSGQALGGHKRSHFVGGSEENSLVIKQGPAAVPCLIDLNLPAPVDE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01098 508 SMART c2h2final6 453 475 IPR013087 -
Bach10g01098 508 SMART c2h2final6 6 28 IPR013087 -
Bach10g01098 508 SMART c2h2final6 101 123 IPR013087 -
Bach10g01098 508 MobiDBLite consensus disorder prediction 125 185 - -
Bach10g01098 508 Gene3D Classic Zinc Finger 1 69 - -
Bach10g01098 508 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Bach10g01098 508 ProSitePatterns Zinc finger C2H2 type domain signature. 103 123 IPR013087 -
Bach10g01098 508 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 508 - -
Bach10g01098 508 ProSiteProfiles Zinc finger C2H2 type domain profile. 453 475 IPR013087 -
Bach10g01098 508 Pfam C2H2-type zinc finger 453 475 - -
Bach10g01098 508 Pfam C2H2-type zinc finger 6 29 - -
Bach10g01098 508 Pfam C2H2-type zinc finger 103 125 - -
Bach10g01098 508 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 128 IPR013087 -
Bach10g01098 508 ProSitePatterns Zinc finger C2H2 type domain signature. 455 475 IPR013087 -
Bach10g01098 508 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Bach10g01098 508 SUPERFAMILY beta-beta-alpha zinc fingers 102 475 IPR036236 -
Bach10g01098 508 MobiDBLite consensus disorder prediction 133 157 - -
Bach10g01098 508 SUPERFAMILY beta-beta-alpha zinc fingers 2 34 IPR036236 -
Bach10g01098 508 MobiDBLite consensus disorder prediction 171 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01098 Bach-Chr10 8157870 8159396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01098 1 508 C2H2 Transcription Factor Family AT1G26610 41.199 6.91e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach10g01098 zf-C2H2_6 8.7e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01098 - - pcin:129310630 553.903