Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01095 ATGTTTGGGTTTAGGAAATCACCAGTCAAGGCTCCTGATTCAAATACTGAATCAGATAAAATGACAACTGCCAGAAGAACTTCTTCAGAAGCTACGCTCATCACACCAAAGGATGATGACGACTATAAAAATGGTTTTCGAGACTCAGGAGGGCTAGAGAATCAGAGTGTCCAAGAGCTGGAGAAATATGCTGTCCACAAATCTGAGGAGACAACAAAGACTGTCAACAATTGCCTGAGGATAGCTGAGGACATCAGAGAGGATGCCACAAGAACACTTGAAACGTTGCATCAGCAGGGTGAGCAAATTAATAGGACTCACAACATGATTGTTGAGACAGAAAAGGATTTGAGTAAGGGTGAAAAACTCCTAAACAATCTTGGGGGTATGTTCTCTATGCCCTGGAAGCCGAAGAAGACCAAGGAAATTCAAGGACCTGTTATTACACCAGCAGATAATTCAACCAAAAAAAGTGGAAAGAATATGGAAGATAGGGAAAAATTGCGCTTAGCTCCTGTGCCTAAAGGCAAGTCTGCTCCTGCAACTCCTCAAAATGAACCAGCAGATGTTTATCAGAAAGTTGATATGGAGAAGGCAAAACAAGACGATGGACTCTCAGATCTCAGTAATATCTTAGGCGATTTGAAGGGTATGGCAATTGACATGGGAACTGAACTTGACAGACAAAACAAAGCTCTTGATTATCTTAGTGACGACGTGGATGAATTGAATTCTCGAGTTAAAGGTGCCAACCAACGTGCACGCAAATTGCTAAGGTAG 780 0.4205 MFGFRKSPVKAPDSNTESDKMTTARRTSSEATLITPKDDDDYKNGFRDSGGLENQSVQELEKYAVHKSEETTKTVNNCLRIAEDIREDATRTLETLHQQGEQINRTHNMIVETEKDLSKGEKLLNNLGGMFSMPWKPKKTKEIQGPVITPADNSTKKSGKNMEDREKLRLAPVPKGKSAPATPQNEPADVYQKVDMEKAKQDDGLSDLSNILGDLKGMAIDMGTELDRQNKALDYLSDDVDELNSRVKGANQRARKLLR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01095 259 MobiDBLite consensus disorder prediction 145 188 - -
Bach10g01095 259 Gene3D - 192 258 - -
Bach10g01095 259 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 195 257 IPR000727 -
Bach10g01095 259 SUPERFAMILY SNARE fusion complex 190 258 - -
Bach10g01095 259 MobiDBLite consensus disorder prediction 32 47 - -
Bach10g01095 259 FunFam SNAP25 homologous protein SNAP33 51 128 - -
Bach10g01095 259 Coils Coil 79 99 - -
Bach10g01095 259 SMART tSNARE_6 190 257 IPR000727 -
Bach10g01095 259 SMART tSNARE_6 60 127 IPR000727 -
Bach10g01095 259 Coils Coil 226 259 - -
Bach10g01095 259 CDD SNARE_Qc 198 256 - -
Bach10g01095 259 Pfam Snare region anchored in the vesicle membrane C-terminus 71 125 - -
Bach10g01095 259 CDD SNARE_SNAP25N_23N_29N_SEC9N 62 126 IPR044766 GO:0005484|GO:0031201
Bach10g01095 259 MobiDBLite consensus disorder prediction 1 57 - -
Bach10g01095 259 SUPERFAMILY SNARE fusion complex 55 126 - -
Bach10g01095 259 MobiDBLite consensus disorder prediction 157 172 - -
Bach10g01095 259 Gene3D - 51 129 - -
Bach10g01095 259 FunFam SNAP25 homologous protein SNAP33 192 259 - -
Bach10g01095 259 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 15 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01095 Bach-Chr10 8112492 8114356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01095 185 255 SNARE and Associated Proteins AT3G09740 40.845 1.70e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01095 K18211 - gmx:100804448 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01095 10 8112492 8114356 Bach10g01095 10 8112492 8114356 ECH