Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01074 ATGGCCAAAAGAAGAAGAGAAAGAGAAGCTGAAGAAGAGAATAATAACAAGAATAATGAGAACGTTGACTTAGAGCAGCTGAAAGAAGAAGCAGCAGCTGTTACAGCAGCTCTAGTTGGAGCTCGAAGAGCTCGAAAACGGTTCATTGGGGTTCGCCAAAGGCCTTCAGGAAGATGGGTTGCTGAGATTAAAGACACCATACACAAGATAAGACTGTGGTTAGGCACTTACGACACTGCAGAAGAGGCTGCAAGAGCTTATGATGAAGCAGCTTGTTTGCTTCGTGGATCCAATACTCGTACAAATTTCTGGCCTTCCCCAACTTCTCACACTAATCCAGCTCTTCCCTCAAAGATTGCTAATCTTCTTCTTCTTAGGCTCAAAGCTAGAACCAATGCCTCTGCTACTTCTGCAGTTGCTCCTTCTTTTCCTGCCAGCCCATATGAGCAGAAAGCACAACTTGAGGTGCCCCGGTTCAACAGTTTTTTGGGTGTACCAGAAACTGGGAATGTTGCAGAAAGTTATGGACTTTCTAGTTATACAGATGATTTTCTGGACATTCCAGAAACTGGGGTAACTCTTACAGAAAGTTATGATGATGCTAGTTATAGTTCTGGCGCCATAACTAGCTGTGACAGTAGCTATGGAAGTGCTGAAGTAAATTTTAACCAAGAGGGTTGTCCAGAGAAATTTGATTTGAAGTATGATGGAGCTGGTAGTGTTGATGGGATTATGAATGAAAAAGGAGCATTTGGAGACTGTGAAATGGGGTTTATTGACTTCCAGTTTGTAGACACTGGGGGGTCAATTTGTTACTCTTCTCCATTTGAGGTAGCAGAGGAAATGGTGGGGCCGATAGAGGAAGAGAATTATGGGGATGAGCCACCATTTATAAGAGAAACTATGAAGATGATGAAGTACGAACGCAAAGTCTCAGCTTGTCTTTACACCTTCAATGGAGTGTGTGAGTGTTTGAGATTTAAACTAGGATCAGAGAATGCAAGTGGGTATGAATTGCTTGAAGGATTAAATCCTTTCACTTAA 1044 0.4243 MAKRRREREAEEENNNKNNENVDLEQLKEEAAAVTAALVGARRARKRFIGVRQRPSGRWVAEIKDTIHKIRLWLGTYDTAEEAARAYDEAACLLRGSNTRTNFWPSPTSHTNPALPSKIANLLLLRLKARTNASATSAVAPSFPASPYEQKAQLEVPRFNSFLGVPETGNVAESYGLSSYTDDFLDIPETGVTLTESYDDASYSSGAITSCDSSYGSAEVNFNQEGCPEKFDLKYDGAGSVDGIMNEKGAFGDCEMGFIDFQFVDTGGSICYSSPFEVAEEMVGPIEEENYGDEPPFIRETMKMMKYERKVSACLYTFNGVCECLRFKLGSENASGYELLEGLNPFT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01074 347 Pfam AP2 domain 47 96 IPR001471 GO:0003700|GO:0006355
Bach10g01074 347 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Bach10g01074 347 FunFam ethylene-responsive transcription factor RAP2-11 46 105 - -
Bach10g01074 347 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
Bach10g01074 347 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Bach10g01074 347 MobiDBLite consensus disorder prediction 1 22 - -
Bach10g01074 347 Coils Coil 1 44 - -
Bach10g01074 347 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Bach10g01074 347 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Bach10g01074 347 CDD AP2 46 103 IPR001471 GO:0003700|GO:0006355
Bach10g01074 347 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 311 - -
Bach10g01074 347 Gene3D AP2/ERF domain 46 104 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01074 Bach-Chr10 7953711 7954754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01074 45 123 AP2-EREBP Transcription Factor Family AT5G19790 70.370 4.86e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach10g01074 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01074 K09286 - qsa:O6P43_025506 283.493