Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01069 ATGGGTAAGTCACCACCATGCTGTGAGGAAGTGGGGTTGAAGAAAGGGCCATGGACTCCGGAGGAAGACCAAAAGCTCATGGCTTACATTGAAGGACATGGCCATGGAAGCTGGCGTGCTATGCCTGCTAAAGCTGGGCTTCGAAGATGTGGGAAGAGTTGCAGACTGAGATGGATCAATTATCTTAGACCTGACATAAAAAGAGGGAAGTTCAGCTTGGAGGAAGAGCGGACGATTATTCGACTCCATGCTCTTATTGGAAACAAATGGTCAACTATAGCAGCTCACCTTCCCCAGAGAACTGACAATGAGATCAAGAACTACTGGCACACCCACCTCAAGAAGAGACTAACCAAAATGGGCATAGACCCCATCACCCACAGGCCCAACGATGCCTACAATCTGAGCCACATGGCTCAGTGGGAGAGTGCTCGGCTGGAAGCCGAAGCCAGACTAGTTCGAGATTCTAGCTTGCAGCTGGTCCAGAACCAGCCCGGCTCCATCTTCTTCAACCCAGCTCGGTTCATTCTCAACAAAATCTCACCTCCTCAACCTTCTGTTCCCCCGCGCCTGGATGTTCTCAAAGCATGGCAACGTTCATGGTCCAACTCACAATCAAATAAAGATCACAGTAGAATGCATGACATGTACGCCGTGATGCTCACCGACGATGACCTGGAGACGCCGACGTCGACGTTTTGCTTCCCTGAAAGCATGCCATTTCCTATCTCAACCACCGCAGGGACATTCAACAATAACTTTCTTCCTTCCACAACCTCTGCCCCAGCCACCGTGGTCTACGTCGGAAAAAGCTCTGCCTCATGCGAGGGTAATGGTAATGAGTCGTGGAAATATTTGCCTACAGAAGATGAACTTGGTGAAAAAATAGTGCATGATAGAGTGTTAGACTTGCAAGACGACGACATCATGGTGGCTGTGGAAGCATTCAGAGCAGCAGCAGGGTGTACTTCAAACAATGTCAATGATGATTTGCTTTACGATTCCATTAATGAAGGTTTAGCAGAAGAAGAAGACAAGTTGGGAGCCATCAATGGGGATGGAAGCAACTGTAACGTGAACTTTGAAGACAATAACAAGCATTATTGGAATAGCCTGCCGAACTTGGTCAATGATTTGCCTTCTGGGTTTCTGATTGAGGAACTTGGATTTGAAAAAATGATAAGACTGGAGAATGAGCATTTGAATAATGTAGGCAAGTTTCGTGCTTTCAAGTCTGTGCCACTGCCCTTCAACTATGACGAAGATTAA 1269 0.4728 MGKSPPCCEEVGLKKGPWTPEEDQKLMAYIEGHGHGSWRAMPAKAGLRRCGKSCRLRWINYLRPDIKRGKFSLEEERTIIRLHALIGNKWSTIAAHLPQRTDNEIKNYWHTHLKKRLTKMGIDPITHRPNDAYNLSHMAQWESARLEAEARLVRDSSLQLVQNQPGSIFFNPARFILNKISPPQPSVPPRLDVLKAWQRSWSNSQSNKDHSRMHDMYAVMLTDDDLETPTSTFCFPESMPFPISTTAGTFNNNFLPSTTSAPATVVYVGKSSASCEGNGNESWKYLPTEDELGEKIVHDRVLDLQDDDIMVAVEAFRAAAGCTSNNVNDDLLYDSINEGLAEEEDKLGAINGDGSNCNVNFEDNNKHYWNSLPNLVNDLPSGFLIEELGFEKMIRLENEHLNNVGKFRAFKSVPLPFNYDED 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01069 422 SMART sant 67 115 IPR001005 -
Bach10g01069 422 SMART sant 14 64 IPR001005 -
Bach10g01069 422 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bach10g01069 422 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bach10g01069 422 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bach10g01069 422 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bach10g01069 422 FunFam MYB transcription factor 69 130 - -
Bach10g01069 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach10g01069 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bach10g01069 422 Gene3D - 14 67 - -
Bach10g01069 422 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 203 - -
Bach10g01069 422 CDD SANT 70 113 IPR001005 -
Bach10g01069 422 Gene3D - 70 117 - -
Bach10g01069 422 FunFam MYB-related transcription factor 14 67 - -
Bach10g01069 422 CDD SANT 17 62 IPR001005 -
Bach10g01069 422 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01069 Bach-Chr10 7919826 7923362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01069 1 381 MYB Transcription Factor Family AT3G01140 43.401 2.15e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach10g01069 Myb_DNA-binding 6.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01069 K09422 - gmx:100809025 412.535