Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01056 ATGACCGATTTTGTCGTTACATATTCGACTTCGTCGTCTGGGATGGGCAGGGTAAAGCTAAAGATAAAGAGGCTGGAGAATTTAAATGGCCGTCACGCAACCTATGCTAAAAGGAAGCAAGGAATCATGAAAAAGGCTTCTGAATTATCCATACTGTGCGATATAGATATTATACTTCTCATGTTCTCACCAAACGGCAAGCCTTCACTATGCAGAGGGAGTCGCAGCAACATAGAGGAAATTATTGAAAAGTTTGCTCAGCTAACTCCACAGGAAAGGGCGAAAAGGAAGTTGGAGAGTCTTGAAGGACTAAAGAAAACGTTTAAGAAGTTGGATCATGATGTAAATATACAAGAGTTTCTGGGTACTAGTAGTCTAACCATTGAGGACCTCAGCAATCGATCCAGAGTATTACAGACTCAAATTTATGAAACACAAAAGAGACTAAGCCATTGGACTGAACCTGATAAAATTAACAGTTTGGAACAATTGGAACAAATGGAAAATTCAATCAGGGAGTCACTTAATCAAATTCGGTCACGTAAGGAAACTATGCAAAAGCAGCAACTTGTGTCACTGCAATGCGGTACTCAGTTCAATGAGATGCATGTTCCTTTCCAAATGAGTCCTGAGCAACATCTCCAACCTCTGTCGTGGATTCCCAACAGTGACAGCCAACATATGGTTTTACCTGAGGATTCAAATTTGCTCGTTCACAGAGATGTAGAGGGCTGTGCAAGCTCCTCTTTTGGGAGTTATGCTACTTACCTTGGCACAAGTACAAAAACAGATATTTCTAATCCCGGGAAAGAAAATGGCTTGCTCAGTGATCTGAGCAGTACTGCTCCTCTGAGACTACAATTGGGAGGGCAGTTTCCATACCTTCCATACAATCTTAATTTACTAAACGATACGAACTTTCAACAAGCAGCAGAGATAAATCCACATGAAAACAAAGTAGATTATCATGTTAGTGGCAGCTTTGAAGCACCTAGACCTGGGTATGACACTAACCACCATGGATGGACGTCCACATCAGGGCCTTGTGCTGTTACTATGTTTGATGAGCATTTGTATGGCCAGGCAAGTTTCCCTCAAGTCAACTATGGCTTCACATAGCAGCAACTGTTTTTTCTTCAATATTTTTTTTCTGGCATTCCTACTGCATGACTTCCTTAAGAATTACTGCCCCTTCTAGTAGCCAGCTGGGAAAATGAGTAAGCTAATGAGAGGGAGAGACAGGAATTGTAATGTCTACAATGAAAGGGGAGTTTTTCCTTGTATATTCTTTAGCCTAAGAATTTTTTTTTTTTTTTTTTTATGGCTACGGGCTTCCTTTGAATGTTGCAGGATCACCAATACTTTTTTCATTGTGGCTGCATTCCATAACATATCCATCATCAAAGCTAAAGAGCTGTGCTAGACATTCCACCCTGATAATACATGTAGATGGCACTGAAG 1461 0.4066 MTDFVVTYSTSSSGMGRVKLKIKRLENLNGRHATYAKRKQGIMKKASELSILCDIDIILLMFSPNGKPSLCRGSRSNIEEIIEKFAQLTPQERAKRKLESLEGLKKTFKKLDHDVNIQEFLGTSSLTIEDLSNRSRVLQTQIYETQKRLSHWTEPDKINSLEQLEQMENSIRESLNQIRSRKETMQKQQLVSLQCGTQFNEMHVPFQMSPEQHLQPLSWIPNSDSQHMVLPEDSNLLVHRDVEGCASSSFGSYATYLGTSTKTDISNPGKENGLLSDLSSTAPLRLQLGGQFPYLPYNLNLLNDTNFQQAAEINPHENKVDYHVSGSFEAPRPGYDTNHHGWTSTSGPCAVTMFDEHLYGQASFPQVNYGFT 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01056 372 Coils Coil 157 184 - -
Bach10g01056 372 Coils Coil 91 111 - -
Bach10g01056 372 Gene3D - 29 110 IPR036879 GO:0003677|GO:0046983
Bach10g01056 372 ProSiteProfiles MADS-box domain profile. 15 67 IPR002100 GO:0003677|GO:0046983
Bach10g01056 372 PANTHER SERUM RESPONSE FACTOR HOMOLOG 17 210 - -
Bach10g01056 372 SUPERFAMILY SRF-like 16 109 IPR036879 GO:0003677|GO:0046983
Bach10g01056 372 FunFam Agamous-like MADS-box protein AGL30 28 110 - -
Bach10g01056 372 PRINTS MADS domain signature 17 37 IPR002100 GO:0003677|GO:0046983
Bach10g01056 372 PRINTS MADS domain signature 52 73 IPR002100 GO:0003677|GO:0046983
Bach10g01056 372 PRINTS MADS domain signature 37 52 IPR002100 GO:0003677|GO:0046983
Bach10g01056 372 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 25 68 IPR002100 GO:0003677|GO:0046983
Bach10g01056 372 CDD MADS_SRF_like 16 96 IPR033897 GO:0000981|GO:0000987|GO:0045944
Bach10g01056 372 SMART madsneu2 15 74 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01056 Bach-Chr10 7804001 7807904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01056 15 365 Type I MADS-box Gene Family AT2G03060 48.691 2.55e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bach10g01056 SRF-TF 1.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01056 - - lang:109356063 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01056 10 7804001 7807904 Bach10g01056 10 7804001 7807904 ECH